No. words: 1399; after pruning: 1373


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.1 (1,1:654)  629  0.15 0.31 0.00  MoSU032F_E12_BE500615Sn30P024C05P005D111F1_088.ab1        1   654 (36)  C MoSU032R_E12_BE500615Sn30P024C05P005D111R1_088.ab1   (53)   656     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  322 nodes

 163 str. conn. components

Path
    1  C MoSU032R_E12_BE500615Sn30P024C05P005D111R1_088.ab1   709 
   86    MoSU032F_E12_BE500615Sn30P024C05P005D111F1_088.ab1    31 
   90  C MoSU032R_E12_BE500615Sn30P024C05P005D111R1_088.ab1   620 
  114    MoSU032F_E12_BE500615Sn30P024C05P005D111F1_088.ab1    59 
  118  C MoSU032R_E12_BE500615Sn30P024C05P005D111R1_088.ab1   592 
  622    MoSU032F_E12_BE500615Sn30P024C05P005D111F1_088.ab1   567 
  630  C MoSU032R_E12_BE500615Sn30P024C05P005D111R1_088.ab1    80 
  634    MoSU032F_E12_BE500615Sn30P024C05P005D111F1_088.ab1   579 
  642  C MoSU032R_E12_BE500615Sn30P024C05P005D111R1_088.ab1    68 
  658    MoSU032F_E12_BE500615Sn30P024C05P005D111F1_088.ab1   603 
  678  C MoSU032R_E12_BE500615Sn30P024C05P005D111R1_088.ab1    32 
  686    MoSU032F_E12_BE500615Sn30P024C05P005D111F1_088.ab1   631 
  690  C MoSU032R_E12_BE500615Sn30P024C05P005D111R1_088.ab1    20 
  702    MoSU032F_E12_BE500615Sn30P024C05P005D111F1_088.ab1   647 
Contig length: old 744, new 745

Contig length: old 745, new 745
New start: 0