No. words: 1620; after pruning: 1594


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.3 (1,1:899)  696  0.42 0.00 0.00  MoSU029F_G06_BE500615Sn31P005D05P024E061F1_036.ab1       46   765 (0)  C MoSU029R_G06_BE500615Sn31P005D05P024E061R1_036.ab1   (0)   855   136 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  352 nodes

 178 str. conn. components

Path
    1    MoSU029F_G06_BE500615Sn31P005D05P024E061F1_036.ab1     1 
  331  C MoSU029R_G06_BE500615Sn31P005D05P024E061R1_036.ab1   570 
  335    MoSU029F_G06_BE500615Sn31P005D05P024E061F1_036.ab1   335 
  343  C MoSU029R_G06_BE500615Sn31P005D05P024E061R1_036.ab1   558 
  363    MoSU029F_G06_BE500615Sn31P005D05P024E061F1_036.ab1   363 
  375  C MoSU029R_G06_BE500615Sn31P005D05P024E061R1_036.ab1   526 
  439    MoSU029F_G06_BE500615Sn31P005D05P024E061F1_036.ab1   439 
  443  C MoSU029R_G06_BE500615Sn31P005D05P024E061R1_036.ab1   458 
  451    MoSU029F_G06_BE500615Sn31P005D05P024E061F1_036.ab1   451 
  455  C MoSU029R_G06_BE500615Sn31P005D05P024E061R1_036.ab1   446 
Contig length: old 900, new 900

Contig length: old 900, new 900
New start: 0