No. words: 1401; after pruning: 1375


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 13.3 (1,1:659)  639  0.00 0.15 0.00  MoSU032F_F12_BE500615Sn31P024C05P005D111F1_086.ab1        1   656 (42)  C MoSU032R_F12_BE500615Sn31P024C05P005D111R1_086.ab1   (42)   661     5 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  326 nodes

 165 str. conn. components

Path
    1  C MoSU032R_F12_BE500615Sn31P024C05P005D111R1_086.ab1   703 
   78    MoSU032F_F12_BE500615Sn31P024C05P005D111F1_086.ab1    35 
   98  C MoSU032R_F12_BE500615Sn31P024C05P005D111R1_086.ab1   606 
  114    MoSU032F_F12_BE500615Sn31P024C05P005D111F1_086.ab1    71 
  122  C MoSU032R_F12_BE500615Sn31P024C05P005D111R1_086.ab1   582 
  182    MoSU032F_F12_BE500615Sn31P024C05P005D111F1_086.ab1   139 
  186  C MoSU032R_F12_BE500615Sn31P024C05P005D111R1_086.ab1   518 
  622    MoSU032F_F12_BE500615Sn31P024C05P005D111F1_086.ab1   579 
  626  C MoSU032R_F12_BE500615Sn31P024C05P005D111R1_086.ab1    78 
  630    MoSU032F_F12_BE500615Sn31P024C05P005D111F1_086.ab1   587 
  634  C MoSU032R_F12_BE500615Sn31P024C05P005D111R1_086.ab1    70 
  666    MoSU032F_F12_BE500615Sn31P024C05P005D111F1_086.ab1   623 
  674  C MoSU032R_F12_BE500615Sn31P024C05P005D111R1_086.ab1    30 
  678    MoSU032F_F12_BE500615Sn31P024C05P005D111F1_086.ab1   635 
Contig length: old 741, new 741

Contig length: old 741, new 741
New start: 0