No. words: 1628; after pruning: 1602


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.4 (1,1:921)  677  0.57 0.00 0.00  MoSU029F_H06_BE500615Sn32P005D05P024E061F1_034.ab1      113   818 (0)  C MoSU029R_H06_BE500615Sn32P005D05P024E061R1_034.ab1   (0)   810   105 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  342 nodes

 173 str. conn. components

Path
    1    MoSU029F_H06_BE500615Sn32P005D05P024E061F1_034.ab1     1 
  244  C MoSU029R_H06_BE500615Sn32P005D05P024E061R1_034.ab1   679 
  248    MoSU029F_H06_BE500615Sn32P005D05P024E061F1_034.ab1   248 
  284  C MoSU029R_H06_BE500615Sn32P005D05P024E061R1_034.ab1   639 
  288    MoSU029F_H06_BE500615Sn32P005D05P024E061F1_034.ab1   288 
  296  C MoSU029R_H06_BE500615Sn32P005D05P024E061R1_034.ab1   627 
  304    MoSU029F_H06_BE500615Sn32P005D05P024E061F1_034.ab1   304 
  312  C MoSU029R_H06_BE500615Sn32P005D05P024E061R1_034.ab1   611 
Contig length: old 922, new 922

Contig length: old 922, new 922
New start: 0