No. words: 1583; after pruning: 1557


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 13.1 (1,1:934)  621  0.62 0.00 0.00  MoSU032F_C08_BE500615Ta11P005D05P024E061F1_060.ab1      281   924 (4)  C MoSU032R_C08_BE500615Ta11P005D05P024E061R1_060.ab1   (0)   655    12 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  310 nodes

 157 str. conn. components

Path
    1    MoSU032F_C08_BE500615Ta11P005D05P024E061F1_060.ab1     1 
  642  C MoSU032R_C08_BE500615Ta11P005D05P024E061R1_060.ab1   294 
Contig length: old 935, new 935

Contig length: old 935, new 935
New start: 0