No. words: 1412; after pruning: 1386


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.9 (1,1:670)  658  0.00 0.00 0.00  MoSU032F_A10_BE500615Ta11P024C05P005D111F1_080.ab1        1   671 (29)  C MoSU032R_A10_BE500615Ta11P024C05P005D111R1_080.ab1   (41)   671     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  338 nodes

 171 str. conn. components

Path
    1  C MoSU032R_A10_BE500615Ta11P024C05P005D111R1_080.ab1   712 
   57    MoSU032F_A10_BE500615Ta11P024C05P005D111F1_080.ab1    16 
   61  C MoSU032R_A10_BE500615Ta11P024C05P005D111R1_080.ab1   652 
   73    MoSU032F_A10_BE500615Ta11P024C05P005D111F1_080.ab1    32 
   77  C MoSU032R_A10_BE500615Ta11P024C05P005D111R1_080.ab1   636 
   81    MoSU032F_A10_BE500615Ta11P024C05P005D111F1_080.ab1    40 
   89  C MoSU032R_A10_BE500615Ta11P024C05P005D111R1_080.ab1   624 
   93    MoSU032F_A10_BE500615Ta11P024C05P005D111F1_080.ab1    52 
   97  C MoSU032R_A10_BE500615Ta11P024C05P005D111R1_080.ab1   616 
  109    MoSU032F_A10_BE500615Ta11P024C05P005D111F1_080.ab1    68 
  113  C MoSU032R_A10_BE500615Ta11P024C05P005D111R1_080.ab1   600 
  481    MoSU032F_A10_BE500615Ta11P024C05P005D111F1_080.ab1   440 
  489  C MoSU032R_A10_BE500615Ta11P024C05P005D111R1_080.ab1   224 
  601    MoSU032F_A10_BE500615Ta11P024C05P005D111F1_080.ab1   560 
  609  C MoSU032R_A10_BE500615Ta11P024C05P005D111R1_080.ab1   104 
  617    MoSU032F_A10_BE500615Ta11P024C05P005D111F1_080.ab1   576 
  649  C MoSU032R_A10_BE500615Ta11P024C05P005D111R1_080.ab1    64 
  653    MoSU032F_A10_BE500615Ta11P024C05P005D111F1_080.ab1   612 
  661  C MoSU032R_A10_BE500615Ta11P024C05P005D111R1_080.ab1    52 
  665    MoSU032F_A10_BE500615Ta11P024C05P005D111F1_080.ab1   624 
  685  C MoSU032R_A10_BE500615Ta11P024C05P005D111R1_080.ab1    28 
  697    MoSU032F_A10_BE500615Ta11P024C05P005D111F1_080.ab1   656 
  705  C MoSU032R_A10_BE500615Ta11P024C05P005D111R1_080.ab1     8 
  709    MoSU032F_A10_BE500615Ta11P024C05P005D111F1_080.ab1   668 
Contig length: old 741, new 741

Contig length: old 741, new 741
New start: 0