No. words: 1712; after pruning: 1686


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 18.0 (1,1:902)  791  0.00 0.00 0.00  MoSU032F_D08_BE500615Ta12P005D05P024E061F1_058.ab1       36   844 (0)  C MoSU032R_D08_BE500615Ta12P005D05P024E061R1_058.ab1   (0)   868    60 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  406 nodes

 205 str. conn. components

Path
    1    MoSU032F_D08_BE500615Ta12P005D05P024E061F1_058.ab1     1 
  583  C MoSU032R_D08_BE500615Ta12P005D05P024E061R1_058.ab1   321 
  611    MoSU032F_D08_BE500615Ta12P005D05P024E061F1_058.ab1   611 
  619  C MoSU032R_D08_BE500615Ta12P005D05P024E061R1_058.ab1   285 
Contig length: old 903, new 903

Contig length: old 903, new 903
New start: 0