No. words: 1406; after pruning: 1380


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 11.5 (1,1:661)  633  0.00 0.30 0.15  MoSU032F_D10_BE500615Ta14P024C05P005D111F1_074.ab1        4   662 (42)  C MoSU032R_D10_BE500615Ta14P024C05P005D111R1_074.ab1   (42)   660     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  322 nodes

 163 str. conn. components

Path
    1  C MoSU032R_D10_BE500615Ta14P024C05P005D111R1_074.ab1   702 
   46    MoSU032F_D10_BE500615Ta14P024C05P005D111F1_074.ab1     7 
  189  C MoSU032R_D10_BE500615Ta14P024C05P005D111R1_074.ab1   512 
  197    MoSU032F_D10_BE500615Ta14P024C05P005D111F1_074.ab1   158 
  209  C MoSU032R_D10_BE500615Ta14P024C05P005D111R1_074.ab1   492 
  217    MoSU032F_D10_BE500615Ta14P024C05P005D111F1_074.ab1   178 
  261  C MoSU032R_D10_BE500615Ta14P024C05P005D111R1_074.ab1   440 
  269    MoSU032F_D10_BE500615Ta14P024C05P005D111F1_074.ab1   230 
  273  C MoSU032R_D10_BE500615Ta14P024C05P005D111R1_074.ab1   428 
  293    MoSU032F_D10_BE500615Ta14P024C05P005D111F1_074.ab1   254 
  297  C MoSU032R_D10_BE500615Ta14P024C05P005D111R1_074.ab1   404 
  353    MoSU032F_D10_BE500615Ta14P024C05P005D111F1_074.ab1   314 
  357  C MoSU032R_D10_BE500615Ta14P024C05P005D111R1_074.ab1   344 
  433    MoSU032F_D10_BE500615Ta14P024C05P005D111F1_074.ab1   394 
  441  C MoSU032R_D10_BE500615Ta14P024C05P005D111R1_074.ab1   260 
  445    MoSU032F_D10_BE500615Ta14P024C05P005D111F1_074.ab1   406 
  449  C MoSU032R_D10_BE500615Ta14P024C05P005D111R1_074.ab1   252 
  597    MoSU032F_D10_BE500615Ta14P024C05P005D111F1_074.ab1   558 
  601  C MoSU032R_D10_BE500615Ta14P024C05P005D111R1_074.ab1   100 
  617    MoSU032F_D10_BE500615Ta14P024C05P005D111F1_074.ab1   578 
  625  C MoSU032R_D10_BE500615Ta14P024C05P005D111R1_074.ab1    76 
  637    MoSU032F_D10_BE500615Ta14P024C05P005D111F1_074.ab1   598 
  641  C MoSU032R_D10_BE500615Ta14P024C05P005D111R1_074.ab1    60 
  669    MoSU032F_D10_BE500615Ta14P024C05P005D111F1_074.ab1   630 
  677  C MoSU032R_D10_BE500615Ta14P024C05P005D111R1_074.ab1    24 
  689    MoSU032F_D10_BE500615Ta14P024C05P005D111F1_074.ab1   650 
Contig length: old 744, new 743

Contig length: old 743, new 745
New start: 0 
I Change at: 65; seg lengths: entry 1, contig 0
I Change at: 100; seg lengths: entry 1, contig 0