No. words: 1414; after pruning: 1388


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.6 (1,1:664)  625  0.45 0.30 0.30  MoSU032F_E10_BE500615Ta15P024C05P005D111F1_072.ab1        2   666 (39)  C MoSU032R_E10_BE500615Ta15P024C05P005D111R1_072.ab1   (44)   665     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  320 nodes

 162 str. conn. components

Path
    1  C MoSU032R_E10_BE500615Ta15P024C05P005D111R1_072.ab1   709 
   52    MoSU032F_E10_BE500615Ta15P024C05P005D111F1_072.ab1     9 
   64  C MoSU032R_E10_BE500615Ta15P024C05P005D111R1_072.ab1   646 
   85    MoSU032F_E10_BE500615Ta15P024C05P005D111F1_072.ab1    41 
   97  C MoSU032R_E10_BE500615Ta15P024C05P005D111R1_072.ab1   613 
  116    MoSU032F_E10_BE500615Ta15P024C05P005D111F1_072.ab1    71 
  140  C MoSU032R_E10_BE500615Ta15P024C05P005D111R1_072.ab1   570 
  144    MoSU032F_E10_BE500615Ta15P024C05P005D111F1_072.ab1    99 
  152  C MoSU032R_E10_BE500615Ta15P024C05P005D111R1_072.ab1   558 
  156    MoSU032F_E10_BE500615Ta15P024C05P005D111F1_072.ab1   111 
  168  C MoSU032R_E10_BE500615Ta15P024C05P005D111R1_072.ab1   542 
  176    MoSU032F_E10_BE500615Ta15P024C05P005D111F1_072.ab1   131 
  188  C MoSU032R_E10_BE500615Ta15P024C05P005D111R1_072.ab1   522 
  208    MoSU032F_E10_BE500615Ta15P024C05P005D111F1_072.ab1   163 
  216  C MoSU032R_E10_BE500615Ta15P024C05P005D111R1_072.ab1   494 
  236    MoSU032F_E10_BE500615Ta15P024C05P005D111F1_072.ab1   191 
  240  C MoSU032R_E10_BE500615Ta15P024C05P005D111R1_072.ab1   470 
  452    MoSU032F_E10_BE500615Ta15P024C05P005D111F1_072.ab1   407 
  460  C MoSU032R_E10_BE500615Ta15P024C05P005D111R1_072.ab1   250 
  556    MoSU032F_E10_BE500615Ta15P024C05P005D111F1_072.ab1   511 
  560  C MoSU032R_E10_BE500615Ta15P024C05P005D111R1_072.ab1   150 
  584    MoSU032F_E10_BE500615Ta15P024C05P005D111F1_072.ab1   539 
  592  C MoSU032R_E10_BE500615Ta15P024C05P005D111R1_072.ab1   118 
  604    MoSU032F_E10_BE500615Ta15P024C05P005D111F1_072.ab1   559 
  608  C MoSU032R_E10_BE500615Ta15P024C05P005D111R1_072.ab1   102 
  620    MoSU032F_E10_BE500615Ta15P024C05P005D111F1_072.ab1   575 
  640  C MoSU032R_E10_BE500615Ta15P024C05P005D111R1_072.ab1    70 
  656    MoSU032F_E10_BE500615Ta15P024C05P005D111F1_072.ab1   611 
  690  C MoSU032R_E10_BE500615Ta15P024C05P005D111R1_072.ab1    21 
  698    MoSU032F_E10_BE500615Ta15P024C05P005D111F1_072.ab1   653 
Contig length: old 749, new 750

Contig length: old 750, new 750
New start: 0