No. words: 1297; after pruning: 1271


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.1 (1,1:564)  534  0.35 0.35 0.00  MoSU032F_F10_BE500615Ta16P024C05P005D111F1_070.ab1        1   564 (133)  C MoSU032R_F10_BE500615Ta16P024C05P005D111R1_070.ab1   (34)   566     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  270 nodes

 137 str. conn. components

Path
    1  C MoSU032R_F10_BE500615Ta16P024C05P005D111R1_070.ab1   600 
   42    MoSU032F_F10_BE500615Ta16P024C05P005D111F1_070.ab1     8 
  260  C MoSU032R_F10_BE500615Ta16P024C05P005D111R1_070.ab1   339 
  268    MoSU032F_F10_BE500615Ta16P024C05P005D111F1_070.ab1   234 
  276  C MoSU032R_F10_BE500615Ta16P024C05P005D111R1_070.ab1   323 
  280    MoSU032F_F10_BE500615Ta16P024C05P005D111F1_070.ab1   246 
  296  C MoSU032R_F10_BE500615Ta16P024C05P005D111R1_070.ab1   303 
  304    MoSU032F_F10_BE500615Ta16P024C05P005D111F1_070.ab1   270 
  320  C MoSU032R_F10_BE500615Ta16P024C05P005D111R1_070.ab1   279 
  424    MoSU032F_F10_BE500615Ta16P024C05P005D111F1_070.ab1   390 
  428  C MoSU032R_F10_BE500615Ta16P024C05P005D111R1_070.ab1   171 
  432    MoSU032F_F10_BE500615Ta16P024C05P005D111F1_070.ab1   398 
  444  C MoSU032R_F10_BE500615Ta16P024C05P005D111R1_070.ab1   155 
  460    MoSU032F_F10_BE500615Ta16P024C05P005D111F1_070.ab1   426 
  464  C MoSU032R_F10_BE500615Ta16P024C05P005D111R1_070.ab1   135 
  472    MoSU032F_F10_BE500615Ta16P024C05P005D111F1_070.ab1   438 
  476  C MoSU032R_F10_BE500615Ta16P024C05P005D111R1_070.ab1   123 
  516    MoSU032F_F10_BE500615Ta16P024C05P005D111F1_070.ab1   482 
  520  C MoSU032R_F10_BE500615Ta16P024C05P005D111R1_070.ab1    79 
  564    MoSU032F_F10_BE500615Ta16P024C05P005D111F1_070.ab1   530 
  568  C MoSU032R_F10_BE500615Ta16P024C05P005D111R1_070.ab1    31 
  580    MoSU032F_F10_BE500615Ta16P024C05P005D111F1_070.ab1   546 
  588  C MoSU032R_F10_BE500615Ta16P024C05P005D111R1_070.ab1    11 
  592    MoSU032F_F10_BE500615Ta16P024C05P005D111F1_070.ab1   558 
Contig length: old 732, new 731

Contig length: old 731, new 732
New start: 0 
S Change at: 38; seg lengths: entry 1, contig 1
I Change at: 51; seg lengths: entry 1, contig 0