No. words: 892; after pruning: 866


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 4.1 (1,1:651)  189  0.52 0.00 0.00  MoSU032F_H10_BE500615Ta18P024C05P005D111F1_066.ab1      460   652 (47)  C MoSU032R_H10_BE500615Ta18P024C05P005D111R1_066.ab1   (0)   193     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  94 nodes

 49 str. conn. components

Path
    1    MoSU032F_H10_BE500615Ta18P024C05P005D111F1_066.ab1     1 
  551  C MoSU032R_H10_BE500615Ta18P024C05P005D111R1_066.ab1   102 
  555    MoSU032F_H10_BE500615Ta18P024C05P005D111F1_066.ab1   555 
  567  C MoSU032R_H10_BE500615Ta18P024C05P005D111R1_066.ab1    86 
  571    MoSU032F_H10_BE500615Ta18P024C05P005D111F1_066.ab1   571 
Contig length: old 699, new 699

Contig length: old 699, new 699
New start: 0