No. words: 1403; after pruning: 1377


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 11.2 (1,1:652)  631  0.00 0.15 0.00  MoSU032F_A11_BE500615Ta19P024C05P005D111F1_095.ab1        1   649 (48)  C MoSU032R_A11_BE500615Ta19P024C05P005D111R1_095.ab1   (52)   654     5 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  324 nodes

 164 str. conn. components

Path
    1  C MoSU032R_A11_BE500615Ta19P024C05P005D111R1_095.ab1   706 
   85    MoSU032F_A11_BE500615Ta19P024C05P005D111F1_095.ab1    32 
  101  C MoSU032R_A11_BE500615Ta19P024C05P005D111R1_095.ab1   606 
  113    MoSU032F_A11_BE500615Ta19P024C05P005D111F1_095.ab1    60 
  117  C MoSU032R_A11_BE500615Ta19P024C05P005D111R1_095.ab1   590 
  121    MoSU032F_A11_BE500615Ta19P024C05P005D111F1_095.ab1    68 
  129  C MoSU032R_A11_BE500615Ta19P024C05P005D111R1_095.ab1   578 
  625    MoSU032F_A11_BE500615Ta19P024C05P005D111F1_095.ab1   572 
  629  C MoSU032R_A11_BE500615Ta19P024C05P005D111R1_095.ab1    78 
  649    MoSU032F_A11_BE500615Ta19P024C05P005D111F1_095.ab1   596 
  653  C MoSU032R_A11_BE500615Ta19P024C05P005D111R1_095.ab1    54 
  661    MoSU032F_A11_BE500615Ta19P024C05P005D111F1_095.ab1   608 
  677  C MoSU032R_A11_BE500615Ta19P024C05P005D111R1_095.ab1    30 
  685    MoSU032F_A11_BE500615Ta19P024C05P005D111F1_095.ab1   632 
  693  C MoSU032R_A11_BE500615Ta19P024C05P005D111R1_095.ab1    14 
  697    MoSU032F_A11_BE500615Ta19P024C05P005D111F1_095.ab1   644 
Contig length: old 750, new 750

Contig length: old 750, new 750
New start: 0