No. words: 1399; after pruning: 1373


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 13.4 (1,1:653)  635  0.00 0.15 0.00  MoSU032F_C11_BE500615Ta21P024C05P005D111F1_091.ab1        1   653 (45)  C MoSU032R_C11_BE500615Ta21P024C05P005D111R1_091.ab1   (46)   655     2 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  326 nodes

 165 str. conn. components

Path
    1  C MoSU032R_C11_BE500615Ta21P024C05P005D111R1_091.ab1   701 
   64    MoSU032F_C11_BE500615Ta21P024C05P005D111F1_091.ab1    17 
   68  C MoSU032R_C11_BE500615Ta21P024C05P005D111R1_091.ab1   634 
   76    MoSU032F_C11_BE500615Ta21P024C05P005D111F1_091.ab1    29 
   80  C MoSU032R_C11_BE500615Ta21P024C05P005D111R1_091.ab1   622 
   88    MoSU032F_C11_BE500615Ta21P024C05P005D111F1_091.ab1    41 
  100  C MoSU032R_C11_BE500615Ta21P024C05P005D111R1_091.ab1   602 
  116    MoSU032F_C11_BE500615Ta21P024C05P005D111F1_091.ab1    69 
  124  C MoSU032R_C11_BE500615Ta21P024C05P005D111R1_091.ab1   578 
  144    MoSU032F_C11_BE500615Ta21P024C05P005D111F1_091.ab1    97 
  148  C MoSU032R_C11_BE500615Ta21P024C05P005D111R1_091.ab1   554 
  456    MoSU032F_C11_BE500615Ta21P024C05P005D111F1_091.ab1   409 
  468  C MoSU032R_C11_BE500615Ta21P024C05P005D111R1_091.ab1   234 
  556    MoSU032F_C11_BE500615Ta21P024C05P005D111F1_091.ab1   509 
  560  C MoSU032R_C11_BE500615Ta21P024C05P005D111R1_091.ab1   142 
  608    MoSU032F_C11_BE500615Ta21P024C05P005D111F1_091.ab1   561 
  612  C MoSU032R_C11_BE500615Ta21P024C05P005D111R1_091.ab1    90 
  624    MoSU032F_C11_BE500615Ta21P024C05P005D111F1_091.ab1   577 
  648  C MoSU032R_C11_BE500615Ta21P024C05P005D111R1_091.ab1    54 
  656    MoSU032F_C11_BE500615Ta21P024C05P005D111F1_091.ab1   609 
  672  C MoSU032R_C11_BE500615Ta21P024C05P005D111R1_091.ab1    30 
  676    MoSU032F_C11_BE500615Ta21P024C05P005D111F1_091.ab1   629 
  684  C MoSU032R_C11_BE500615Ta21P024C05P005D111R1_091.ab1    18 
  696    MoSU032F_C11_BE500615Ta21P024C05P005D111F1_091.ab1   649 
Contig length: old 745, new 745

Contig length: old 745, new 745
New start: 0