No. words: 1405; after pruning: 1379


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.2 (1,1:666)  621  0.00 0.91 0.15  MoSU032F_D11_BE500615Ta22P024C05P005D111F1_089.ab1        5   666 (44)  C MoSU032R_D11_BE500615Ta22P024C05P005D111R1_089.ab1   (28)   667     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  314 nodes

 159 str. conn. components

Path
    1  C MoSU032R_D11_BE500615Ta22P024C05P005D111R1_089.ab1   695 
   43    MoSU032F_D11_BE500615Ta22P024C05P005D111F1_089.ab1    17 
   47  C MoSU032R_D11_BE500615Ta22P024C05P005D111R1_089.ab1   649 
   68    MoSU032F_D11_BE500615Ta22P024C05P005D111F1_089.ab1    40 
   92  C MoSU032R_D11_BE500615Ta22P024C05P005D111R1_089.ab1   604 
  103    MoSU032F_D11_BE500615Ta22P024C05P005D111F1_089.ab1    74 
  147  C MoSU032R_D11_BE500615Ta22P024C05P005D111R1_089.ab1   549 
  155    MoSU032F_D11_BE500615Ta22P024C05P005D111F1_089.ab1   126 
  163  C MoSU032R_D11_BE500615Ta22P024C05P005D111R1_089.ab1   533 
  167    MoSU032F_D11_BE500615Ta22P024C05P005D111F1_089.ab1   138 
  187  C MoSU032R_D11_BE500615Ta22P024C05P005D111R1_089.ab1   509 
  199    MoSU032F_D11_BE500615Ta22P024C05P005D111F1_089.ab1   170 
  207  C MoSU032R_D11_BE500615Ta22P024C05P005D111R1_089.ab1   489 
  211    MoSU032F_D11_BE500615Ta22P024C05P005D111F1_089.ab1   182 
  227  C MoSU032R_D11_BE500615Ta22P024C05P005D111R1_089.ab1   469 
  239    MoSU032F_D11_BE500615Ta22P024C05P005D111F1_089.ab1   210 
  243  C MoSU032R_D11_BE500615Ta22P024C05P005D111R1_089.ab1   453 
  299    MoSU032F_D11_BE500615Ta22P024C05P005D111F1_089.ab1   270 
  311  C MoSU032R_D11_BE500615Ta22P024C05P005D111R1_089.ab1   385 
  447    MoSU032F_D11_BE500615Ta22P024C05P005D111F1_089.ab1   418 
  451  C MoSU032R_D11_BE500615Ta22P024C05P005D111R1_089.ab1   245 
  619    MoSU032F_D11_BE500615Ta22P024C05P005D111F1_089.ab1   590 
  643  C MoSU032R_D11_BE500615Ta22P024C05P005D111R1_089.ab1    53 
  651    MoSU032F_D11_BE500615Ta22P024C05P005D111F1_089.ab1   622 
  685  C MoSU032R_D11_BE500615Ta22P024C05P005D111R1_089.ab1    11 
  689    MoSU032F_D11_BE500615Ta22P024C05P005D111F1_089.ab1   660 
Contig length: old 738, new 739

Contig length: old 739, new 739
New start: 0