No. words: 1212; after pruning: 1186


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.9 (1,1:611)  491  0.39 0.00 0.00  MoSU032F_F11_BE500615Ta24P024C05P005D111F1_085.ab1      105   612 (92)  C MoSU032R_F11_BE500615Ta24P024C05P005D111R1_085.ab1   (0)   508     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  252 nodes

 128 str. conn. components

Path
    1    MoSU032F_F11_BE500615Ta24P024C05P005D111F1_085.ab1     1 
  300  C MoSU032R_F11_BE500615Ta24P024C05P005D111R1_085.ab1   313 
  308    MoSU032F_F11_BE500615Ta24P024C05P005D111F1_085.ab1   308 
  332  C MoSU032R_F11_BE500615Ta24P024C05P005D111R1_085.ab1   281 
  364    MoSU032F_F11_BE500615Ta24P024C05P005D111F1_085.ab1   364 
  368  C MoSU032R_F11_BE500615Ta24P024C05P005D111R1_085.ab1   245 
  404    MoSU032F_F11_BE500615Ta24P024C05P005D111F1_085.ab1   404 
  416  C MoSU032R_F11_BE500615Ta24P024C05P005D111R1_085.ab1   197 
  508    MoSU032F_F11_BE500615Ta24P024C05P005D111F1_085.ab1   508 
  520  C MoSU032R_F11_BE500615Ta24P024C05P005D111R1_085.ab1    93 
  572    MoSU032F_F11_BE500615Ta24P024C05P005D111F1_085.ab1   572 
  592  C MoSU032R_F11_BE500615Ta24P024C05P005D111R1_085.ab1    21 
  608    MoSU032F_F11_BE500615Ta24P024C05P005D111F1_085.ab1   608 
Contig length: old 704, new 704

Contig length: old 704, new 704
New start: 0