No. words: 1633; after pruning: 1607


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.3 (1,1:854)  739  0.90 0.00 0.00  MoSU032F_C07_BE500615Td03P005D05P024E061F1_059.ab1       27   804 (0)  C MoSU032R_C07_BE500615Td03P005D05P024E061R1_059.ab1   (0)   829    52 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  370 nodes

 187 str. conn. components

Path
    1    MoSU032F_C07_BE500615Td03P005D05P024E061F1_059.ab1     1 
  391  C MoSU032R_C07_BE500615Td03P005D05P024E061R1_059.ab1   465 
  395    MoSU032F_C07_BE500615Td03P005D05P024E061F1_059.ab1   395 
  415  C MoSU032R_C07_BE500615Td03P005D05P024E061R1_059.ab1   441 
  419    MoSU032F_C07_BE500615Td03P005D05P024E061F1_059.ab1   419 
  479  C MoSU032R_C07_BE500615Td03P005D05P024E061R1_059.ab1   377 
  487    MoSU032F_C07_BE500615Td03P005D05P024E061F1_059.ab1   487 
  519  C MoSU032R_C07_BE500615Td03P005D05P024E061R1_059.ab1   337 
  535    MoSU032F_C07_BE500615Td03P005D05P024E061F1_059.ab1   535 
  539  C MoSU032R_C07_BE500615Td03P005D05P024E061R1_059.ab1   317 
Contig length: old 855, new 855

Contig length: old 855, new 855
New start: 0