No. words: 1349; after pruning: 1323


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.8 (1,1:938)  396  0.49 0.00 0.00  MoSU032F_E07_BE500615Td05P005D05P024E061F1_055.ab1      276   685 (0)  C MoSU032R_E07_BE500615Td05P005D05P024E061R1_055.ab1   (0)   664   255 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  202 nodes

 103 str. conn. components

Path
    1    MoSU032F_E07_BE500615Td05P005D05P024E061F1_055.ab1     1 
  379  C MoSU032R_E07_BE500615Td05P005D05P024E061R1_055.ab1   561 
  383    MoSU032F_E07_BE500615Td05P005D05P024E061F1_055.ab1   383 
  395  C MoSU032R_E07_BE500615Td05P005D05P024E061R1_055.ab1   545 
  399    MoSU032F_E07_BE500615Td05P005D05P024E061F1_055.ab1   399 
  431  C MoSU032R_E07_BE500615Td05P005D05P024E061R1_055.ab1   509 
  439    MoSU032F_E07_BE500615Td05P005D05P024E061F1_055.ab1   439 
  451  C MoSU032R_E07_BE500615Td05P005D05P024E061R1_055.ab1   489 
  459    MoSU032F_E07_BE500615Td05P005D05P024E061F1_055.ab1   459 
  471  C MoSU032R_E07_BE500615Td05P005D05P024E061R1_055.ab1   469 
  475    MoSU032F_E07_BE500615Td05P005D05P024E061F1_055.ab1   475 
  491  C MoSU032R_E07_BE500615Td05P005D05P024E061R1_055.ab1   449 
Contig length: old 939, new 939

Contig length: old 939, new 939
New start: 0