No. words: 1398; after pruning: 1372


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.0 (1,1:857)  525  0.00 0.00 0.00  MoSU004F_A09_BE500615Tu01P005D05D111F1_065.ab1      133   672 (0)  C MoSU004R_A09_BE500615Tu01P005D05D111R1_065.ab1   (0)   726   187 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  272 nodes

 138 str. conn. components

Path
    1    MoSU004F_A09_BE500615Tu01P005D05D111F1_065.ab1     1 
  300  C MoSU004R_A09_BE500615Tu01P005D05D111R1_065.ab1   559 
  304    MoSU004F_A09_BE500615Tu01P005D05D111F1_065.ab1   304 
  340  C MoSU004R_A09_BE500615Tu01P005D05D111R1_065.ab1   519 
  344    MoSU004F_A09_BE500615Tu01P005D05D111F1_065.ab1   344 
  352  C MoSU004R_A09_BE500615Tu01P005D05D111R1_065.ab1   507 
  360    MoSU004F_A09_BE500615Tu01P005D05D111F1_065.ab1   360 
  392  C MoSU004R_A09_BE500615Tu01P005D05D111R1_065.ab1   467 
  416    MoSU004F_A09_BE500615Tu01P005D05D111F1_065.ab1   416 
  436  C MoSU004R_A09_BE500615Tu01P005D05D111R1_065.ab1   423 
  452    MoSU004F_A09_BE500615Tu01P005D05D111F1_065.ab1   452 
  456  C MoSU004R_A09_BE500615Tu01P005D05D111R1_065.ab1   403 
  464    MoSU004F_A09_BE500615Tu01P005D05D111F1_065.ab1   464 
  472  C MoSU004R_A09_BE500615Tu01P005D05D111R1_065.ab1   387 
  480    MoSU004F_A09_BE500615Tu01P005D05D111F1_065.ab1   480 
  484  C MoSU004R_A09_BE500615Tu01P005D05D111R1_065.ab1   375 
Contig length: old 858, new 858

Contig length: old 858, new 858
New start: 0