No. words: 1266; after pruning: 1240


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.0 (1,1:899)  354  0.27 0.00 0.00  MoSU004F_B09_BE500615Tu02P005D05D111F1_073.ab1      124   489 (0)  C MoSU004R_B09_BE500615Tu02P005D05D111R1_073.ab1   (0)   777   412 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  182 nodes

 93 str. conn. components

Path
    1    MoSU004F_B09_BE500615Tu02P005D05D111F1_073.ab1     1 
  316  C MoSU004R_B09_BE500615Tu02P005D05D111R1_073.ab1   585 
  332    MoSU004F_B09_BE500615Tu02P005D05D111F1_073.ab1   332 
  340  C MoSU004R_B09_BE500615Tu02P005D05D111R1_073.ab1   561 
Contig length: old 900, new 900

Contig length: old 900, new 900
New start: 0