No. words: 1242; after pruning: 1216


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.8 (1,1:543)  440  5.51 0.00 0.18  MoSU035F_A01_BE518357Tu01P019G03P019G091F1_015.ab1        1   544 (37)  C MoSU035R_A01_BE518357Tu01P019G03P019G091R1_015.ab1   (118)   543     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  180 nodes

 92 str. conn. components

Path
    1  C MoSU035R_A01_BE518357Tu01P019G03P019G091R1_015.ab1   661 
  646    MoSU035F_A01_BE518357Tu01P019G03P019G091F1_015.ab1   528 
Contig length: old 698, new 699

Contig length: old 699, new 699
New start: 0