No. words: 1558; after pruning: 1532


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.7 (1,1:1074)  466  0.00 0.00 0.41  MoSU007F_H09_BE518436Ld02P015E05E111F1_065.ab1      260   743 (0)  C MoSU007R_H09_BE518436Ld02P015E05E111R1_065.ab1   (0)   815   334 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  236 nodes

 120 str. conn. components

Path
    1    MoSU007F_H09_BE518436Ld02P015E05E111F1_065.ab1     1 
  529  C MoSU007R_H09_BE518436Ld02P015E05E111R1_065.ab1   548 
Contig length: old 1075, new 1076

Contig length: old 1076, new 1076
New start: 0