No. words: 1439; after pruning: 1413


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.3 (1,1:1062)  370  0.00 0.00 0.00  MoSU007F_G10_BE518436Ld09P015E05E111F1_068.ab1      298   673 (0)  C MoSU007R_G10_BE518436Ld09P015E05E111R1_068.ab1   (0)   766   391 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  190 nodes

 97 str. conn. components

Path
    1    MoSU007F_G10_BE518436Ld09P015E05E111F1_068.ab1     1 
  449  C MoSU007R_G10_BE518436Ld09P015E05E111R1_068.ab1   615 
  453    MoSU007F_G10_BE518436Ld09P015E05E111F1_068.ab1   453 
  469  C MoSU007R_G10_BE518436Ld09P015E05E111R1_068.ab1   595 
  477    MoSU007F_G10_BE518436Ld09P015E05E111F1_068.ab1   477 
  485  C MoSU007R_G10_BE518436Ld09P015E05E111R1_068.ab1   579 
  501    MoSU007F_G10_BE518436Ld09P015E05E111F1_068.ab1   501 
  513  C MoSU007R_G10_BE518436Ld09P015E05E111R1_068.ab1   551 
Contig length: old 1063, new 1063

Contig length: old 1063, new 1063
New start: 0