No. words: 1121; after pruning: 1095


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.2 (1,1:518)  503  0.19 0.19 0.19  MoSU028F_F02_BE590476Sn24P030C01P005C071F1_006.ab1        1   519 (44)  C MoSU028R_F02_BE590476Sn24P030C01P005C071R1_006.ab1   (39)   519     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  252 nodes

 128 str. conn. components

Path
    1  C MoSU028R_F02_BE590476Sn24P030C01P005C071R1_006.ab1   558 
   81    MoSU028F_F02_BE590476Sn24P030C01P005C071F1_006.ab1    41 
   85  C MoSU028R_F02_BE590476Sn24P030C01P005C071R1_006.ab1   474 
  109    MoSU028F_F02_BE590476Sn24P030C01P005C071F1_006.ab1    69 
  113  C MoSU028R_F02_BE590476Sn24P030C01P005C071R1_006.ab1   446 
  117    MoSU028F_F02_BE590476Sn24P030C01P005C071F1_006.ab1    77 
  133  C MoSU028R_F02_BE590476Sn24P030C01P005C071R1_006.ab1   426 
  173    MoSU028F_F02_BE590476Sn24P030C01P005C071F1_006.ab1   133 
Contig length: old 602, new 603

Contig length: old 603, new 603
New start: 0