No. words: 1132; after pruning: 1106


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.3 (1,1:535)  510  0.00 0.19 0.74  MoSU028F_A07_BE590476Sn25P030A01P005C071F1_063.ab1        1   538 (31)  C MoSU028R_A07_BE590476Sn25P030A01P005C071R1_063.ab1   (27)   536     2 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  254 nodes

 129 str. conn. components

Path
    1  C MoSU028R_A07_BE590476Sn25P030A01P005C071R1_063.ab1   563 
  211    MoSU028F_A07_BE590476Sn25P030A01P005C071F1_063.ab1   183 
  323  C MoSU028R_A07_BE590476Sn25P030A01P005C071R1_063.ab1   241 
  327    MoSU028F_A07_BE590476Sn25P030A01P005C071F1_063.ab1   299 
Contig length: old 596, new 597

Contig length: old 597, new 597
New start: 0