No. words: 1123; after pruning: 1097


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.8 (1,1:519)  503  0.00 0.19 0.38  MoSU028F_G02_BE590476Sn25P030C01P005C071F1_004.ab1        1   521 (43)  C MoSU028R_G02_BE590476Sn25P030C01P005C071R1_004.ab1   (39)   520     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  252 nodes

 128 str. conn. components

Path
    1  C MoSU028R_G02_BE590476Sn25P030C01P005C071R1_004.ab1   559 
   82    MoSU028F_G02_BE590476Sn25P030C01P005C071F1_004.ab1    42 
   86  C MoSU028R_G02_BE590476Sn25P030C01P005C071R1_004.ab1   474 
  106    MoSU028F_G02_BE590476Sn25P030C01P005C071F1_004.ab1    66 
  114  C MoSU028R_G02_BE590476Sn25P030C01P005C071R1_004.ab1   446 
  122    MoSU028F_G02_BE590476Sn25P030C01P005C071F1_004.ab1    82 
  138  C MoSU028R_G02_BE590476Sn25P030C01P005C071R1_004.ab1   422 
  146    MoSU028F_G02_BE590476Sn25P030C01P005C071F1_004.ab1   106 
  302  C MoSU028R_G02_BE590476Sn25P030C01P005C071R1_004.ab1   258 
  306    MoSU028F_G02_BE590476Sn25P030C01P005C071F1_004.ab1   266 
Contig length: old 603, new 604

Contig length: old 604, new 604
New start: 0