No. words: 1140; after pruning: 1100


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 8.7 (1,1:532)  497  1.50 0.19 0.19  MoSU028F_A03_BE590476Sn27P030C01P005C071F1_031.ab1        2   533 (45)  C MoSU028R_A03_BE590476Sn27P030C01P005C071R1_031.ab1   (30)   532     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  242 nodes

 123 str. conn. components

Path
    1  C MoSU028R_A03_BE590476Sn27P030C01P005C071R1_031.ab1   562 
   41    MoSU028F_A03_BE590476Sn27P030C01P005C071F1_031.ab1    12 
   78  C MoSU028R_A03_BE590476Sn27P030C01P005C071R1_031.ab1   484 
  100    MoSU028F_A03_BE590476Sn27P030C01P005C071F1_031.ab1    71 
  108  C MoSU028R_A03_BE590476Sn27P030C01P005C071R1_031.ab1   454 
  120    MoSU028F_A03_BE590476Sn27P030C01P005C071F1_031.ab1    91 
  128  C MoSU028R_A03_BE590476Sn27P030C01P005C071R1_031.ab1   434 
  140    MoSU028F_A03_BE590476Sn27P030C01P005C071F1_031.ab1   111 
  164  C MoSU028R_A03_BE590476Sn27P030C01P005C071R1_031.ab1   398 
  172    MoSU028F_A03_BE590476Sn27P030C01P005C071F1_031.ab1   143 
  204  C MoSU028R_A03_BE590476Sn27P030C01P005C071R1_031.ab1   358 
  208    MoSU028F_A03_BE590476Sn27P030C01P005C071F1_031.ab1   179 
  216  C MoSU028R_A03_BE590476Sn27P030C01P005C071R1_031.ab1   346 
  220    MoSU028F_A03_BE590476Sn27P030C01P005C071F1_031.ab1   191 
  236  C MoSU028R_A03_BE590476Sn27P030C01P005C071R1_031.ab1   326 
  240    MoSU028F_A03_BE590476Sn27P030C01P005C071F1_031.ab1   211 
  252  C MoSU028R_A03_BE590476Sn27P030C01P005C071R1_031.ab1   310 
  268    MoSU028F_A03_BE590476Sn27P030C01P005C071F1_031.ab1   239 
  304  C MoSU028R_A03_BE590476Sn27P030C01P005C071R1_031.ab1   258 
  308    MoSU028F_A03_BE590476Sn27P030C01P005C071F1_031.ab1   279 
  332  C MoSU028R_A03_BE590476Sn27P030C01P005C071R1_031.ab1   230 
  360    MoSU028F_A03_BE590476Sn27P030C01P005C071F1_031.ab1   331 
  364  C MoSU028R_A03_BE590476Sn27P030C01P005C071R1_031.ab1   198 
  420    MoSU028F_A03_BE590476Sn27P030C01P005C071F1_031.ab1   391 
  428  C MoSU028R_A03_BE590476Sn27P030C01P005C071R1_031.ab1   134 
  436    MoSU028F_A03_BE590476Sn27P030C01P005C071F1_031.ab1   407 
  448  C MoSU028R_A03_BE590476Sn27P030C01P005C071R1_031.ab1   114 
  456    MoSU028F_A03_BE590476Sn27P030C01P005C071F1_031.ab1   427 
Contig length: old 607, new 607

Contig length: old 607, new 607
New start: 0