No. words: 1123; after pruning: 1097


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.5 (1,1:526)  496  0.38 0.38 0.57  MoSU028F_D07_BE590476Sn32P030A01P005C071F1_057.ab1        1   529 (40)  C MoSU028R_D07_BE590476Sn32P030A01P005C071R1_057.ab1   (26)   528     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  250 nodes

 127 str. conn. components

Path
    1  C MoSU028R_D07_BE590476Sn32P030A01P005C071R1_057.ab1   554 
  109    MoSU028F_D07_BE590476Sn32P030A01P005C071F1_057.ab1    81 
  113  C MoSU028R_D07_BE590476Sn32P030A01P005C071R1_057.ab1   442 
  213    MoSU028F_D07_BE590476Sn32P030A01P005C071F1_057.ab1   185 
  221  C MoSU028R_D07_BE590476Sn32P030A01P005C071R1_057.ab1   334 
  253    MoSU028F_D07_BE590476Sn32P030A01P005C071F1_057.ab1   225 
  321  C MoSU028R_D07_BE590476Sn32P030A01P005C071R1_057.ab1   234 
  341    MoSU028F_D07_BE590476Sn32P030A01P005C071F1_057.ab1   313 
Contig length: old 596, new 597

Contig length: old 597, new 597
New start: 0