No. words: 1128; after pruning: 1102


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.6 (1,1:527)  510  0.00 0.19 0.38  MoSU028F_F03_BE590476Sn32P030C01P005C071F1_021.ab1        1   529 (41)  C MoSU028R_F03_BE590476Sn32P030C01P005C071R1_021.ab1   (30)   528     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  254 nodes

 129 str. conn. components

Path
    1  C MoSU028R_F03_BE590476Sn32P030C01P005C071R1_021.ab1   558 
   77    MoSU028F_F03_BE590476Sn32P030C01P005C071F1_021.ab1    46 
   97  C MoSU028R_F03_BE590476Sn32P030C01P005C071R1_021.ab1   462 
  105    MoSU028F_F03_BE590476Sn32P030C01P005C071F1_021.ab1    74 
  109  C MoSU028R_F03_BE590476Sn32P030C01P005C071R1_021.ab1   450 
  117    MoSU028F_F03_BE590476Sn32P030C01P005C071F1_021.ab1    86 
  129  C MoSU028R_F03_BE590476Sn32P030C01P005C071R1_021.ab1   430 
  189    MoSU028F_F03_BE590476Sn32P030C01P005C071F1_021.ab1   158 
  301  C MoSU028R_F03_BE590476Sn32P030C01P005C071R1_021.ab1   258 
  305    MoSU028F_F03_BE590476Sn32P030C01P005C071F1_021.ab1   274 
Contig length: old 600, new 601

Contig length: old 601, new 601
New start: 0