No. words: 1131; after pruning: 1091


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.5 (1,1:521)  508  0.19 0.19 0.19  MoSU028F_B01_BE590476Ta12P030C01P005C071F1_013.ab1        1   522 (40)  C MoSU028R_B01_BE590476Ta12P030C01P005C071R1_013.ab1   (47)   522     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  254 nodes

 129 str. conn. components

Path
    1  C MoSU028R_B01_BE590476Ta12P030C01P005C071R1_013.ab1   569 
   86    MoSU028F_B01_BE590476Ta12P030C01P005C071F1_013.ab1    38 
   98  C MoSU028R_B01_BE590476Ta12P030C01P005C071R1_013.ab1   472 
  102    MoSU028F_B01_BE590476Ta12P030C01P005C071F1_013.ab1    54 
  114  C MoSU028R_B01_BE590476Ta12P030C01P005C071R1_013.ab1   456 
  126    MoSU028F_B01_BE590476Ta12P030C01P005C071F1_013.ab1    78 
  190  C MoSU028R_B01_BE590476Ta12P030C01P005C071R1_013.ab1   380 
  198    MoSU028F_B01_BE590476Ta12P030C01P005C071F1_013.ab1   150 
  210  C MoSU028R_B01_BE590476Ta12P030C01P005C071R1_013.ab1   360 
  234    MoSU028F_B01_BE590476Ta12P030C01P005C071F1_013.ab1   186 
  246  C MoSU028R_B01_BE590476Ta12P030C01P005C071R1_013.ab1   324 
  254    MoSU028F_B01_BE590476Ta12P030C01P005C071F1_013.ab1   206 
  342  C MoSU028R_B01_BE590476Ta12P030C01P005C071R1_013.ab1   228 
  366    MoSU028F_B01_BE590476Ta12P030C01P005C071F1_013.ab1   318 
Contig length: old 609, new 610

Contig length: old 610, new 610
New start: 0