No. words: 1134; after pruning: 1108


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 11.1 (1,1:536)  522  0.00 0.00 0.37  MoSU025F_E02_BE590476Ta13P030A01P005C071F1_008.ab1        2   538 (40)  C MoSU025R_E02_BE590476Ta13P030A01P005C071R1_008.ab1   (21)   535     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  262 nodes

 133 str. conn. components

Path
    1  C MoSU025R_E02_BE590476Ta13P030A01P005C071R1_008.ab1   556 
  121    MoSU025F_E02_BE590476Ta13P030A01P005C071F1_008.ab1   101 
  133  C MoSU025R_E02_BE590476Ta13P030A01P005C071R1_008.ab1   424 
  137    MoSU025F_E02_BE590476Ta13P030A01P005C071F1_008.ab1   117 
  193  C MoSU025R_E02_BE590476Ta13P030A01P005C071R1_008.ab1   364 
  209    MoSU025F_E02_BE590476Ta13P030A01P005C071F1_008.ab1   189 
  241  C MoSU025R_E02_BE590476Ta13P030A01P005C071R1_008.ab1   316 
  249    MoSU025F_E02_BE590476Ta13P030A01P005C071F1_008.ab1   229 
  289  C MoSU025R_E02_BE590476Ta13P030A01P005C071R1_008.ab1   268 
  297    MoSU025F_E02_BE590476Ta13P030A01P005C071F1_008.ab1   277 
  321  C MoSU025R_E02_BE590476Ta13P030A01P005C071R1_008.ab1   236 
  337    MoSU025F_E02_BE590476Ta13P030A01P005C071F1_008.ab1   317 
  353  C MoSU025R_E02_BE590476Ta13P030A01P005C071R1_008.ab1   204 
  377    MoSU025F_E02_BE590476Ta13P030A01P005C071F1_008.ab1   357 
Contig length: old 597, new 598

Contig length: old 598, new 598
New start: 0