No. words: 1126; after pruning: 1100


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 9.8 (1,1:528)  512  0.00 0.00 0.38  MoSU025F_F02_BE590476Ta14P030A01P005C071F1_006.ab1        4   530 (41)  C MoSU025R_F02_BE590476Ta14P030A01P005C071R1_006.ab1   (30)   525     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  258 nodes

 131 str. conn. components

Path
    1  C MoSU025R_F02_BE590476Ta14P030A01P005C071R1_006.ab1   555 
  122    MoSU025F_F02_BE590476Ta14P030A01P005C071F1_006.ab1    95 
  126  C MoSU025R_F02_BE590476Ta14P030A01P005C071R1_006.ab1   430 
  130    MoSU025F_F02_BE590476Ta14P030A01P005C071F1_006.ab1   103 
  134  C MoSU025R_F02_BE590476Ta14P030A01P005C071R1_006.ab1   422 
  210    MoSU025F_F02_BE590476Ta14P030A01P005C071F1_006.ab1   183 
  238  C MoSU025R_F02_BE590476Ta14P030A01P005C071R1_006.ab1   318 
  250    MoSU025F_F02_BE590476Ta14P030A01P005C071F1_006.ab1   223 
  322  C MoSU025R_F02_BE590476Ta14P030A01P005C071R1_006.ab1   234 
  338    MoSU025F_F02_BE590476Ta14P030A01P005C071F1_006.ab1   311 
  350  C MoSU025R_F02_BE590476Ta14P030A01P005C071R1_006.ab1   206 
  378    MoSU025F_F02_BE590476Ta14P030A01P005C071F1_006.ab1   351 
Contig length: old 597, new 598

Contig length: old 598, new 598
New start: 0