No. words: 1115; after pruning: 1089


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 10.0 (1,1:512)  504  0.00 0.00 0.00  MoSU028F_D01_BE590476Ta14P030C01P005C071F1_009.ab1        1   509 (47)  C MoSU028R_D01_BE590476Ta14P030C01P005C071R1_009.ab1   (46)   513     5 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  256 nodes

 130 str. conn. components

Path
    1  C MoSU028R_D01_BE590476Ta14P030C01P005C071R1_009.ab1   559 
   78    MoSU028F_D01_BE590476Ta14P030C01P005C071F1_009.ab1    32 
   86  C MoSU028R_D01_BE590476Ta14P030C01P005C071R1_009.ab1   474 
  122    MoSU028F_D01_BE590476Ta14P030C01P005C071F1_009.ab1    76 
  130  C MoSU028R_D01_BE590476Ta14P030C01P005C071R1_009.ab1   430 
  146    MoSU028F_D01_BE590476Ta14P030C01P005C071F1_009.ab1   100 
  182  C MoSU028R_D01_BE590476Ta14P030C01P005C071R1_009.ab1   378 
  190    MoSU028F_D01_BE590476Ta14P030C01P005C071F1_009.ab1   144 
  294  C MoSU028R_D01_BE590476Ta14P030C01P005C071R1_009.ab1   266 
  306    MoSU028F_D01_BE590476Ta14P030C01P005C071F1_009.ab1   260 
Contig length: old 602, new 602

Contig length: old 602, new 602
New start: 0