No. words: 1120; after pruning: 1094


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 10.0 (1,1:517)  505  0.00 0.19 0.00  MoSU028F_G01_BE590476Ta17P030C01P005C071F1_003.ab1        1   514 (48)  C MoSU028R_G01_BE590476Ta17P030C01P005C071R1_003.ab1   (39)   519     5 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  256 nodes

 130 str. conn. components

Path
    1  C MoSU028R_G01_BE590476Ta17P030C01P005C071R1_003.ab1   558 
   81    MoSU028F_G01_BE590476Ta17P030C01P005C071F1_003.ab1    41 
   85  C MoSU028R_G01_BE590476Ta17P030C01P005C071R1_003.ab1   474 
  117    MoSU028F_G01_BE590476Ta17P030C01P005C071F1_003.ab1    77 
  129  C MoSU028R_G01_BE590476Ta17P030C01P005C071R1_003.ab1   430 
  189    MoSU028F_G01_BE590476Ta17P030C01P005C071F1_003.ab1   149 
Contig length: old 602, new 602

Contig length: old 602, new 602
New start: 0