No. words: 1127; after pruning: 1101


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 11.0 (1,1:530)  512  0.00 0.00 0.38  MoSU025F_D03_BE590476Ta20P030A01P005C071F1_025.ab1        1   528 (47)  C MoSU025R_D03_BE590476Ta20P030A01P005C071R1_025.ab1   (22)   530     5 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  260 nodes

 132 str. conn. components

Path
    1  C MoSU025R_D03_BE590476Ta20P030A01P005C071R1_025.ab1   552 
   82    MoSU025F_D03_BE590476Ta20P030A01P005C071F1_025.ab1    60 
   90  C MoSU025R_D03_BE590476Ta20P030A01P005C071R1_025.ab1   463 
  106    MoSU025F_D03_BE590476Ta20P030A01P005C071F1_025.ab1    84 
  126  C MoSU025R_D03_BE590476Ta20P030A01P005C071R1_025.ab1   427 
  234    MoSU025F_D03_BE590476Ta20P030A01P005C071F1_025.ab1   212 
  242  C MoSU025R_D03_BE590476Ta20P030A01P005C071R1_025.ab1   311 
  246    MoSU025F_D03_BE590476Ta20P030A01P005C071F1_025.ab1   224 
  262  C MoSU025R_D03_BE590476Ta20P030A01P005C071R1_025.ab1   291 
  266    MoSU025F_D03_BE590476Ta20P030A01P005C071F1_025.ab1   244 
  278  C MoSU025R_D03_BE590476Ta20P030A01P005C071R1_025.ab1   275 
  298    MoSU025F_D03_BE590476Ta20P030A01P005C071F1_025.ab1   276 
  318  C MoSU025R_D03_BE590476Ta20P030A01P005C071R1_025.ab1   235 
  330    MoSU025F_D03_BE590476Ta20P030A01P005C071F1_025.ab1   308 
  350  C MoSU025R_D03_BE590476Ta20P030A01P005C071R1_025.ab1   203 
  378    MoSU025F_D03_BE590476Ta20P030A01P005C071F1_025.ab1   356 
  422  C MoSU025R_D03_BE590476Ta20P030A01P005C071R1_025.ab1   131 
  426    MoSU025F_D03_BE590476Ta20P030A01P005C071F1_025.ab1   404 
  498  C MoSU025R_D03_BE590476Ta20P030A01P005C071R1_025.ab1    55 
  502    MoSU025F_D03_BE590476Ta20P030A01P005C071F1_025.ab1   480 
Contig length: old 596, new 597

Contig length: old 597, new 597
New start: 0