No. words: 1127; after pruning: 1087


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.5 (1,1:510)  496  0.20 0.20 0.20  MoSU028F_B02_BE590476Ta20P030C01P005C071F1_014.ab1        1   511 (53)  C MoSU028R_B02_BE590476Ta20P030C01P005C071R1_014.ab1   (52)   511     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  248 nodes

 126 str. conn. components

Path
    1  C MoSU028R_B02_BE590476Ta20P030C01P005C071R1_014.ab1   563 
   90    MoSU028F_B02_BE590476Ta20P030C01P005C071F1_014.ab1    37 
  102  C MoSU028R_B02_BE590476Ta20P030C01P005C071R1_014.ab1   462 
  106    MoSU028F_B02_BE590476Ta20P030C01P005C071F1_014.ab1    53 
  114  C MoSU028R_B02_BE590476Ta20P030C01P005C071R1_014.ab1   450 
  118    MoSU028F_B02_BE590476Ta20P030C01P005C071F1_014.ab1    65 
  122  C MoSU028R_B02_BE590476Ta20P030C01P005C071R1_014.ab1   442 
  130    MoSU028F_B02_BE590476Ta20P030C01P005C071F1_014.ab1    77 
  314  C MoSU028R_B02_BE590476Ta20P030C01P005C071R1_014.ab1   250 
  326    MoSU028F_B02_BE590476Ta20P030C01P005C071F1_014.ab1   273 
Contig length: old 616, new 617

Contig length: old 617, new 617
New start: 0