No. words: 1127; after pruning: 1101


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.2 (1,1:528)  515  0.00 0.00 0.38  MoSU025F_G03_BE590476Ta23P030A01P005C071F1_019.ab1        1   530 (42)  C MoSU025R_G03_BE590476Ta23P030A01P005C071R1_019.ab1   (27)   528     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  258 nodes

 131 str. conn. components

Path
    1  C MoSU025R_G03_BE590476Ta23P030A01P005C071R1_019.ab1   555 
  107    MoSU025F_G03_BE590476Ta23P030A01P005C071F1_019.ab1    80 
  131  C MoSU025R_G03_BE590476Ta23P030A01P005C071R1_019.ab1   425 
  211    MoSU025F_G03_BE590476Ta23P030A01P005C071F1_019.ab1   184 
  287  C MoSU025R_G03_BE590476Ta23P030A01P005C071R1_019.ab1   269 
  295    MoSU025F_G03_BE590476Ta23P030A01P005C071F1_019.ab1   268 
  323  C MoSU025R_G03_BE590476Ta23P030A01P005C071R1_019.ab1   233 
  335    MoSU025F_G03_BE590476Ta23P030A01P005C071F1_019.ab1   308 
Contig length: old 598, new 599

Contig length: old 599, new 599
New start: 0