No. words: 1133; after pruning: 1107


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 10.8 (1,1:534)  517  0.00 0.00 0.38  MoSU025F_D01_BE590476Td04P030A01P005C071F1_009.ab1        5   536 (41)  C MoSU025R_D01_BE590476Td04P030A01P005C071R1_009.ab1   (26)   530     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  258 nodes

 131 str. conn. components

Path
    1  C MoSU025R_D01_BE590476Td04P030A01P005C071R1_009.ab1   556 
   54    MoSU025F_D01_BE590476Td04P030A01P005C071F1_009.ab1    32 
   58  C MoSU025R_D01_BE590476Td04P030A01P005C071R1_009.ab1   499 
   70    MoSU025F_D01_BE590476Td04P030A01P005C071F1_009.ab1    48 
   98  C MoSU025R_D01_BE590476Td04P030A01P005C071R1_009.ab1   459 
  106    MoSU025F_D01_BE590476Td04P030A01P005C071F1_009.ab1    84 
  134  C MoSU025R_D01_BE590476Td04P030A01P005C071R1_009.ab1   423 
  138    MoSU025F_D01_BE590476Td04P030A01P005C071F1_009.ab1   116 
  166  C MoSU025R_D01_BE590476Td04P030A01P005C071R1_009.ab1   391 
  174    MoSU025F_D01_BE590476Td04P030A01P005C071F1_009.ab1   152 
  190  C MoSU025R_D01_BE590476Td04P030A01P005C071R1_009.ab1   367 
  198    MoSU025F_D01_BE590476Td04P030A01P005C071F1_009.ab1   176 
  206  C MoSU025R_D01_BE590476Td04P030A01P005C071R1_009.ab1   351 
  214    MoSU025F_D01_BE590476Td04P030A01P005C071F1_009.ab1   192 
  238  C MoSU025R_D01_BE590476Td04P030A01P005C071R1_009.ab1   319 
  246    MoSU025F_D01_BE590476Td04P030A01P005C071F1_009.ab1   224 
  290  C MoSU025R_D01_BE590476Td04P030A01P005C071R1_009.ab1   267 
  294    MoSU025F_D01_BE590476Td04P030A01P005C071F1_009.ab1   272 
  322  C MoSU025R_D01_BE590476Td04P030A01P005C071R1_009.ab1   235 
  330    MoSU025F_D01_BE590476Td04P030A01P005C071F1_009.ab1   308 
Contig length: old 598, new 599

Contig length: old 599, new 599
New start: 0