No. words: 1135; after pruning: 1109


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.4 (1,1:529)  513  0.00 0.19 0.38  MoSU025F_E01_BE590476Td05P030A01P005C071F1_007.ab1        1   531 (40)  C MoSU025R_E01_BE590476Td05P030A01P005C071R1_007.ab1   (34)   530     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  256 nodes

 130 str. conn. components

Path
    1  C MoSU025R_E01_BE590476Td05P030A01P005C071R1_007.ab1   564 
   67    MoSU025F_E01_BE590476Td05P030A01P005C071F1_007.ab1    32 
   71  C MoSU025R_E01_BE590476Td05P030A01P005C071R1_007.ab1   494 
   75    MoSU025F_E01_BE590476Td05P030A01P005C071F1_007.ab1    40 
   83  C MoSU025R_E01_BE590476Td05P030A01P005C071R1_007.ab1   482 
   91    MoSU025F_E01_BE590476Td05P030A01P005C071F1_007.ab1    56 
  103  C MoSU025R_E01_BE590476Td05P030A01P005C071R1_007.ab1   462 
  131    MoSU025F_E01_BE590476Td05P030A01P005C071F1_007.ab1    96 
  135  C MoSU025R_E01_BE590476Td05P030A01P005C071R1_007.ab1   430 
  223    MoSU025F_E01_BE590476Td05P030A01P005C071F1_007.ab1   188 
  227  C MoSU025R_E01_BE590476Td05P030A01P005C071R1_007.ab1   338 
  231    MoSU025F_E01_BE590476Td05P030A01P005C071F1_007.ab1   196 
  247  C MoSU025R_E01_BE590476Td05P030A01P005C071R1_007.ab1   318 
  255    MoSU025F_E01_BE590476Td05P030A01P005C071F1_007.ab1   220 
  287  C MoSU025R_E01_BE590476Td05P030A01P005C071R1_007.ab1   278 
  307    MoSU025F_E01_BE590476Td05P030A01P005C071F1_007.ab1   272 
  331  C MoSU025R_E01_BE590476Td05P030A01P005C071R1_007.ab1   234 
  343    MoSU025F_E01_BE590476Td05P030A01P005C071F1_007.ab1   308 
  479  C MoSU025R_E01_BE590476Td05P030A01P005C071R1_007.ab1    86 
  483    MoSU025F_E01_BE590476Td05P030A01P005C071F1_007.ab1   448 
  491  C MoSU025R_E01_BE590476Td05P030A01P005C071R1_007.ab1    74 
  495    MoSU025F_E01_BE590476Td05P030A01P005C071F1_007.ab1   460 
Contig length: old 605, new 606

Contig length: old 606, new 606
New start: 0