No. words: 1133; after pruning: 1107


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.4 (1,1:529)  517  0.00 0.19 0.19  MoSU025F_G01_BE590476Td07P030A01P005C071F1_003.ab1        1   530 (41)  C MoSU025R_G01_BE590476Td07P030A01P005C071R1_003.ab1   (32)   530     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  262 nodes

 133 str. conn. components

Path
    1  C MoSU025R_G01_BE590476Td07P030A01P005C071R1_003.ab1   562 
  125    MoSU025F_G01_BE590476Td07P030A01P005C071F1_003.ab1    92 
  137  C MoSU025R_G01_BE590476Td07P030A01P005C071R1_003.ab1   426 
  169    MoSU025F_G01_BE590476Td07P030A01P005C071F1_003.ab1   136 
  361  C MoSU025R_G01_BE590476Td07P030A01P005C071R1_003.ab1   202 
  381    MoSU025F_G01_BE590476Td07P030A01P005C071F1_003.ab1   348 
Contig length: old 603, new 604

Contig length: old 604, new 604
New start: 0