No. words: 1144; after pruning: 1118


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.9 (1,1:536)  532  0.00 0.00 0.00  MoSU025F_H01_BE590476Td08P030A01P005C071F1_001.ab1        1   537 (39)  C MoSU025R_H01_BE590476Td08P030A01P005C071R1_001.ab1   (31)   537     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  270 nodes

 137 str. conn. components

Path
    1  C MoSU025R_H01_BE590476Td08P030A01P005C071R1_001.ab1   568 
   39    MoSU025F_H01_BE590476Td08P030A01P005C071F1_001.ab1     8 
   43  C MoSU025R_H01_BE590476Td08P030A01P005C071R1_001.ab1   526 
   63    MoSU025F_H01_BE590476Td08P030A01P005C071F1_001.ab1    32 
   67  C MoSU025R_H01_BE590476Td08P030A01P005C071R1_001.ab1   502 
   71    MoSU025F_H01_BE590476Td08P030A01P005C071F1_001.ab1    40 
   75  C MoSU025R_H01_BE590476Td08P030A01P005C071R1_001.ab1   494 
   79    MoSU025F_H01_BE590476Td08P030A01P005C071F1_001.ab1    48 
   99  C MoSU025R_H01_BE590476Td08P030A01P005C071R1_001.ab1   470 
  107    MoSU025F_H01_BE590476Td08P030A01P005C071F1_001.ab1    76 
  123  C MoSU025R_H01_BE590476Td08P030A01P005C071R1_001.ab1   446 
  127    MoSU025F_H01_BE590476Td08P030A01P005C071F1_001.ab1    96 
  135  C MoSU025R_H01_BE590476Td08P030A01P005C071R1_001.ab1   434 
  143    MoSU025F_H01_BE590476Td08P030A01P005C071F1_001.ab1   112 
  147  C MoSU025R_H01_BE590476Td08P030A01P005C071R1_001.ab1   422 
  155    MoSU025F_H01_BE590476Td08P030A01P005C071F1_001.ab1   124 
  163  C MoSU025R_H01_BE590476Td08P030A01P005C071R1_001.ab1   406 
  171    MoSU025F_H01_BE590476Td08P030A01P005C071F1_001.ab1   140 
  179  C MoSU025R_H01_BE590476Td08P030A01P005C071R1_001.ab1   390 
  187    MoSU025F_H01_BE590476Td08P030A01P005C071F1_001.ab1   156 
  191  C MoSU025R_H01_BE590476Td08P030A01P005C071R1_001.ab1   378 
  223    MoSU025F_H01_BE590476Td08P030A01P005C071F1_001.ab1   192 
  287  C MoSU025R_H01_BE590476Td08P030A01P005C071R1_001.ab1   282 
  307    MoSU025F_H01_BE590476Td08P030A01P005C071F1_001.ab1   276 
  335  C MoSU025R_H01_BE590476Td08P030A01P005C071R1_001.ab1   234 
  339    MoSU025F_H01_BE590476Td08P030A01P005C071F1_001.ab1   308 
  387  C MoSU025R_H01_BE590476Td08P030A01P005C071R1_001.ab1   182 
  391    MoSU025F_H01_BE590476Td08P030A01P005C071F1_001.ab1   360 
  431  C MoSU025R_H01_BE590476Td08P030A01P005C071R1_001.ab1   138 
  435    MoSU025F_H01_BE590476Td08P030A01P005C071F1_001.ab1   404 
  447  C MoSU025R_H01_BE590476Td08P030A01P005C071R1_001.ab1   122 
  451    MoSU025F_H01_BE590476Td08P030A01P005C071F1_001.ab1   420 
  479  C MoSU025R_H01_BE590476Td08P030A01P005C071R1_001.ab1    90 
  495    MoSU025F_H01_BE590476Td08P030A01P005C071F1_001.ab1   464 
  511  C MoSU025R_H01_BE590476Td08P030A01P005C071R1_001.ab1    58 
  515    MoSU025F_H01_BE590476Td08P030A01P005C071F1_001.ab1   484 
  531  C MoSU025R_H01_BE590476Td08P030A01P005C071R1_001.ab1    38 
  535    MoSU025F_H01_BE590476Td08P030A01P005C071F1_001.ab1   504 
Contig length: old 607, new 607

Contig length: old 607, new 607
New start: 0