No. words: 1163; after pruning: 1123


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.2 (1,1:604)  544  0.18 0.36 0.00  MoSU013F_G07_BE591127Ld01P018A02P018A081F1_051.ab1       12   567 (0)  C MoSU013R_G07_BE591127Ld01P018A02P018A081R1_051.ab1   (0)   596    39 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  268 nodes

 136 str. conn. components

Path
    1    MoSU013F_G07_BE591127Ld01P018A02P018A081F1_051.ab1     1 
   48  C MoSU013R_G07_BE591127Ld01P018A02P018A081R1_051.ab1   558 
   56    MoSU013F_G07_BE591127Ld01P018A02P018A081F1_051.ab1    56 
   84  C MoSU013R_G07_BE591127Ld01P018A02P018A081R1_051.ab1   522 
   92    MoSU013F_G07_BE591127Ld01P018A02P018A081F1_051.ab1    92 
  100  C MoSU013R_G07_BE591127Ld01P018A02P018A081R1_051.ab1   506 
  104    MoSU013F_G07_BE591127Ld01P018A02P018A081F1_051.ab1   104 
  124  C MoSU013R_G07_BE591127Ld01P018A02P018A081R1_051.ab1   482 
Contig length: old 605, new 605

Contig length: old 605, new 606
New start: 0 
I Change at: 33; seg lengths: entry 1, contig 0