No. words: 1371; after pruning: 1345


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 9.8 (1,1:610)  589  0.00 0.33 0.16  MoSU013F_A08_BE591127Ld03P018A02P018A081F1_064.ab1        1   607 (95)  C MoSU013R_A08_BE591127Ld03P018A02P018A081R1_064.ab1   (57)   612     5 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  292 nodes

 148 str. conn. components

Path
    1  C MoSU013R_A08_BE591127Ld03P018A02P018A081R1_064.ab1   669 
   86    MoSU013F_A08_BE591127Ld03P018A02P018A081F1_064.ab1    27 
   90  C MoSU013R_A08_BE591127Ld03P018A02P018A081R1_064.ab1   580 
   94    MoSU013F_A08_BE591127Ld03P018A02P018A081F1_064.ab1    35 
  118  C MoSU013R_A08_BE591127Ld03P018A02P018A081R1_064.ab1   552 
  122    MoSU013F_A08_BE591127Ld03P018A02P018A081F1_064.ab1    63 
  134  C MoSU013R_A08_BE591127Ld03P018A02P018A081R1_064.ab1   536 
  138    MoSU013F_A08_BE591127Ld03P018A02P018A081F1_064.ab1    79 
  150  C MoSU013R_A08_BE591127Ld03P018A02P018A081R1_064.ab1   520 
  158    MoSU013F_A08_BE591127Ld03P018A02P018A081F1_064.ab1    99 
  598  C MoSU013R_A08_BE591127Ld03P018A02P018A081R1_064.ab1    72 
  606    MoSU013F_A08_BE591127Ld03P018A02P018A081F1_064.ab1   547 
  618  C MoSU013R_A08_BE591127Ld03P018A02P018A081R1_064.ab1    52 
  622    MoSU013F_A08_BE591127Ld03P018A02P018A081F1_064.ab1   563 
Contig length: old 760, new 761

Contig length: old 761, new 761
New start: 0