No. words: 1548; after pruning: 1522


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.0 (1,1:635)  628  0.16 0.00 0.00  MoSU005F_H03_BE591127Ld04P015H01H071F1_028.ab1        1   636 (125)  C MoSU005R_H03_BE591127Ld04P015H01H071R1_028.ab1   (151)   636     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  318 nodes

 161 str. conn. components

Path
    1  C MoSU005R_H03_BE591127Ld04P015H01H071R1_028.ab1   787 
  167    MoSU005F_H03_BE591127Ld04P015H01H071F1_028.ab1    16 
  195  C MoSU005R_H03_BE591127Ld04P015H01H071R1_028.ab1   593 
  203    MoSU005F_H03_BE591127Ld04P015H01H071F1_028.ab1    52 
  211  C MoSU005R_H03_BE591127Ld04P015H01H071R1_028.ab1   577 
  215    MoSU005F_H03_BE591127Ld04P015H01H071F1_028.ab1    64 
  247  C MoSU005R_H03_BE591127Ld04P015H01H071R1_028.ab1   541 
  251    MoSU005F_H03_BE591127Ld04P015H01H071F1_028.ab1   100 
  371  C MoSU005R_H03_BE591127Ld04P015H01H071R1_028.ab1   417 
  379    MoSU005F_H03_BE591127Ld04P015H01H071F1_028.ab1   228 
  403  C MoSU005R_H03_BE591127Ld04P015H01H071R1_028.ab1   385 
  411    MoSU005F_H03_BE591127Ld04P015H01H071F1_028.ab1   260 
  467  C MoSU005R_H03_BE591127Ld04P015H01H071R1_028.ab1   321 
  471    MoSU005F_H03_BE591127Ld04P015H01H071F1_028.ab1   320 
  475  C MoSU005R_H03_BE591127Ld04P015H01H071R1_028.ab1   313 
  479    MoSU005F_H03_BE591127Ld04P015H01H071F1_028.ab1   328 
  483  C MoSU005R_H03_BE591127Ld04P015H01H071R1_028.ab1   305 
  511    MoSU005F_H03_BE591127Ld04P015H01H071F1_028.ab1   360 
  523  C MoSU005R_H03_BE591127Ld04P015H01H071R1_028.ab1   265 
  551    MoSU005F_H03_BE591127Ld04P015H01H071F1_028.ab1   400 
  559  C MoSU005R_H03_BE591127Ld04P015H01H071R1_028.ab1   229 
  563    MoSU005F_H03_BE591127Ld04P015H01H071F1_028.ab1   412 
  571  C MoSU005R_H03_BE591127Ld04P015H01H071R1_028.ab1   217 
  595    MoSU005F_H03_BE591127Ld04P015H01H071F1_028.ab1   444 
  599  C MoSU005R_H03_BE591127Ld04P015H01H071R1_028.ab1   189 
  603    MoSU005F_H03_BE591127Ld04P015H01H071F1_028.ab1   452 
  611  C MoSU005R_H03_BE591127Ld04P015H01H071R1_028.ab1   177 
  623    MoSU005F_H03_BE591127Ld04P015H01H071F1_028.ab1   472 
  627  C MoSU005R_H03_BE591127Ld04P015H01H071R1_028.ab1   161 
  631    MoSU005F_H03_BE591127Ld04P015H01H071F1_028.ab1   480 
  643  C MoSU005R_H03_BE591127Ld04P015H01H071R1_028.ab1   145 
  655    MoSU005F_H03_BE591127Ld04P015H01H071F1_028.ab1   504 
  659  C MoSU005R_H03_BE591127Ld04P015H01H071R1_028.ab1   129 
  667    MoSU005F_H03_BE591127Ld04P015H01H071F1_028.ab1   516 
  671  C MoSU005R_H03_BE591127Ld04P015H01H071R1_028.ab1   117 
  675    MoSU005F_H03_BE591127Ld04P015H01H071F1_028.ab1   524 
  687  C MoSU005R_H03_BE591127Ld04P015H01H071R1_028.ab1   101 
  739    MoSU005F_H03_BE591127Ld04P015H01H071F1_028.ab1   588 
  755  C MoSU005R_H03_BE591127Ld04P015H01H071R1_028.ab1    33 
  759    MoSU005F_H03_BE591127Ld04P015H01H071F1_028.ab1   608 
  779  C MoSU005R_H03_BE591127Ld04P015H01H071R1_028.ab1     9 
  783    MoSU005F_H03_BE591127Ld04P015H01H071F1_028.ab1   632 
Contig length: old 912, new 912

Contig length: old 912, new 912
New start: 0