No. words: 1563; after pruning: 1537


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.1 (1,1:646)  636  0.31 0.00 0.00  MoSU005F_A04_BE591127Ld05P015H01H071F1_021.ab1        1   647 (141)  C MoSU005R_A04_BE591127Ld05P015H01H071R1_021.ab1   (128)   647     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  316 nodes

 160 str. conn. components

Path
    1  C MoSU005R_A04_BE591127Ld05P015H01H071R1_021.ab1   775 
  132    MoSU005F_A04_BE591127Ld05P015H01H071F1_021.ab1     4 
  140  C MoSU005R_A04_BE591127Ld05P015H01H071R1_021.ab1   636 
  151    MoSU005F_A04_BE591127Ld05P015H01H071F1_021.ab1    23 
  183  C MoSU005R_A04_BE591127Ld05P015H01H071R1_021.ab1   593 
  191    MoSU005F_A04_BE591127Ld05P015H01H071F1_021.ab1    63 
  223  C MoSU005R_A04_BE591127Ld05P015H01H071R1_021.ab1   553 
  227    MoSU005F_A04_BE591127Ld05P015H01H071F1_021.ab1    99 
  271  C MoSU005R_A04_BE591127Ld05P015H01H071R1_021.ab1   505 
  275    MoSU005F_A04_BE591127Ld05P015H01H071F1_021.ab1   147 
  295  C MoSU005R_A04_BE591127Ld05P015H01H071R1_021.ab1   481 
  311    MoSU005F_A04_BE591127Ld05P015H01H071F1_021.ab1   183 
  315  C MoSU005R_A04_BE591127Ld05P015H01H071R1_021.ab1   461 
  319    MoSU005F_A04_BE591127Ld05P015H01H071F1_021.ab1   191 
  355  C MoSU005R_A04_BE591127Ld05P015H01H071R1_021.ab1   421 
  363    MoSU005F_A04_BE591127Ld05P015H01H071F1_021.ab1   235 
  375  C MoSU005R_A04_BE591127Ld05P015H01H071R1_021.ab1   401 
  399    MoSU005F_A04_BE591127Ld05P015H01H071F1_021.ab1   271 
  407  C MoSU005R_A04_BE591127Ld05P015H01H071R1_021.ab1   369 
  423    MoSU005F_A04_BE591127Ld05P015H01H071F1_021.ab1   295 
  447  C MoSU005R_A04_BE591127Ld05P015H01H071R1_021.ab1   329 
  459    MoSU005F_A04_BE591127Ld05P015H01H071F1_021.ab1   331 
  475  C MoSU005R_A04_BE591127Ld05P015H01H071R1_021.ab1   301 
  519    MoSU005F_A04_BE591127Ld05P015H01H071F1_021.ab1   391 
  523  C MoSU005R_A04_BE591127Ld05P015H01H071R1_021.ab1   253 
  539    MoSU005F_A04_BE591127Ld05P015H01H071F1_021.ab1   411 
  547  C MoSU005R_A04_BE591127Ld05P015H01H071R1_021.ab1   229 
  587    MoSU005F_A04_BE591127Ld05P015H01H071F1_021.ab1   459 
  603  C MoSU005R_A04_BE591127Ld05P015H01H071R1_021.ab1   173 
  607    MoSU005F_A04_BE591127Ld05P015H01H071F1_021.ab1   479 
  615  C MoSU005R_A04_BE591127Ld05P015H01H071R1_021.ab1   161 
  639    MoSU005F_A04_BE591127Ld05P015H01H071F1_021.ab1   511 
  647  C MoSU005R_A04_BE591127Ld05P015H01H071R1_021.ab1   129 
  667    MoSU005F_A04_BE591127Ld05P015H01H071F1_021.ab1   539 
  671  C MoSU005R_A04_BE591127Ld05P015H01H071R1_021.ab1   105 
  691    MoSU005F_A04_BE591127Ld05P015H01H071F1_021.ab1   563 
  695  C MoSU005R_A04_BE591127Ld05P015H01H071R1_021.ab1    81 
  703    MoSU005F_A04_BE591127Ld05P015H01H071F1_021.ab1   575 
  707  C MoSU005R_A04_BE591127Ld05P015H01H071R1_021.ab1    69 
  723    MoSU005F_A04_BE591127Ld05P015H01H071F1_021.ab1   595 
  743  C MoSU005R_A04_BE591127Ld05P015H01H071R1_021.ab1    33 
  751    MoSU005F_A04_BE591127Ld05P015H01H071F1_021.ab1   623 
Contig length: old 916, new 916

Contig length: old 916, new 916
New start: 0