No. words: 1563; after pruning: 1537


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.9 (1,1:646)  631  0.62 0.00 0.00  MoSU005F_B04_BE591127Ld06P015H01H071F1_029.ab1        1   647 (132)  C MoSU005R_B04_BE591127Ld06P015H01H071R1_029.ab1   (137)   647     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  316 nodes

 160 str. conn. components

Path
    1  C MoSU005R_B04_BE591127Ld06P015H01H071R1_029.ab1   784 
  141    MoSU005F_B04_BE591127Ld06P015H01H071F1_029.ab1     4 
  145  C MoSU005R_B04_BE591127Ld06P015H01H071R1_029.ab1   640 
  165    MoSU005F_B04_BE591127Ld06P015H01H071F1_029.ab1    28 
  185  C MoSU005R_B04_BE591127Ld06P015H01H071R1_029.ab1   600 
  189    MoSU005F_B04_BE591127Ld06P015H01H071F1_029.ab1    52 
  193  C MoSU005R_B04_BE591127Ld06P015H01H071R1_029.ab1   592 
  201    MoSU005F_B04_BE591127Ld06P015H01H071F1_029.ab1    64 
  209  C MoSU005R_B04_BE591127Ld06P015H01H071R1_029.ab1   576 
  213    MoSU005F_B04_BE591127Ld06P015H01H071F1_029.ab1    76 
  281  C MoSU005R_B04_BE591127Ld06P015H01H071R1_029.ab1   504 
  285    MoSU005F_B04_BE591127Ld06P015H01H071F1_029.ab1   148 
  381  C MoSU005R_B04_BE591127Ld06P015H01H071R1_029.ab1   404 
  385    MoSU005F_B04_BE591127Ld06P015H01H071F1_029.ab1   248 
  397  C MoSU005R_B04_BE591127Ld06P015H01H071R1_029.ab1   388 
  409    MoSU005F_B04_BE591127Ld06P015H01H071F1_029.ab1   272 
  429  C MoSU005R_B04_BE591127Ld06P015H01H071R1_029.ab1   356 
  433    MoSU005F_B04_BE591127Ld06P015H01H071F1_029.ab1   296 
  461  C MoSU005R_B04_BE591127Ld06P015H01H071R1_029.ab1   324 
  477    MoSU005F_B04_BE591127Ld06P015H01H071F1_029.ab1   340 
  485  C MoSU005R_B04_BE591127Ld06P015H01H071R1_029.ab1   300 
  501    MoSU005F_B04_BE591127Ld06P015H01H071F1_029.ab1   364 
  513  C MoSU005R_B04_BE591127Ld06P015H01H071R1_029.ab1   272 
  585    MoSU005F_B04_BE591127Ld06P015H01H071F1_029.ab1   448 
  589  C MoSU005R_B04_BE591127Ld06P015H01H071R1_029.ab1   196 
  597    MoSU005F_B04_BE591127Ld06P015H01H071F1_029.ab1   460 
  609  C MoSU005R_B04_BE591127Ld06P015H01H071R1_029.ab1   176 
  617    MoSU005F_B04_BE591127Ld06P015H01H071F1_029.ab1   480 
  625  C MoSU005R_B04_BE591127Ld06P015H01H071R1_029.ab1   160 
  649    MoSU005F_B04_BE591127Ld06P015H01H071F1_029.ab1   512 
  657  C MoSU005R_B04_BE591127Ld06P015H01H071R1_029.ab1   128 
  677    MoSU005F_B04_BE591127Ld06P015H01H071F1_029.ab1   540 
  681  C MoSU005R_B04_BE591127Ld06P015H01H071R1_029.ab1   104 
  733    MoSU005F_B04_BE591127Ld06P015H01H071F1_029.ab1   596 
  749  C MoSU005R_B04_BE591127Ld06P015H01H071R1_029.ab1    36 
  757    MoSU005F_B04_BE591127Ld06P015H01H071F1_029.ab1   620 
Contig length: old 916, new 916

Contig length: old 916, new 916
New start: 0