No. words: 1571; after pruning: 1545


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 12.9 (1,1:661)  645  0.15 0.30 0.00  MoSU005F_C04_BE591127Ld07P015H01H071F1_022.ab1        3   661 (131)  C MoSU005R_C04_BE591127Ld07P015H01H071R1_022.ab1   (118)   661     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  322 nodes

 163 str. conn. components

Path
    1  C MoSU005R_C04_BE591127Ld07P015H01H071R1_022.ab1   779 
  134    MoSU005F_C04_BE591127Ld07P015H01H071F1_022.ab1    16 
  142  C MoSU005R_C04_BE591127Ld07P015H01H071R1_022.ab1   638 
  158    MoSU005F_C04_BE591127Ld07P015H01H071F1_022.ab1    40 
  190  C MoSU005R_C04_BE591127Ld07P015H01H071R1_022.ab1   590 
  194    MoSU005F_C04_BE591127Ld07P015H01H071F1_022.ab1    76 
  266  C MoSU005R_C04_BE591127Ld07P015H01H071R1_022.ab1   514 
  270    MoSU005F_C04_BE591127Ld07P015H01H071F1_022.ab1   152 
  278  C MoSU005R_C04_BE591127Ld07P015H01H071R1_022.ab1   502 
  282    MoSU005F_C04_BE591127Ld07P015H01H071F1_022.ab1   164 
  346  C MoSU005R_C04_BE591127Ld07P015H01H071R1_022.ab1   434 
  350    MoSU005F_C04_BE591127Ld07P015H01H071F1_022.ab1   232 
  382  C MoSU005R_C04_BE591127Ld07P015H01H071R1_022.ab1   398 
  406    MoSU005F_C04_BE591127Ld07P015H01H071F1_022.ab1   288 
  410  C MoSU005R_C04_BE591127Ld07P015H01H071R1_022.ab1   370 
  414    MoSU005F_C04_BE591127Ld07P015H01H071F1_022.ab1   296 
  442  C MoSU005R_C04_BE591127Ld07P015H01H071R1_022.ab1   338 
  454    MoSU005F_C04_BE591127Ld07P015H01H071F1_022.ab1   336 
  458  C MoSU005R_C04_BE591127Ld07P015H01H071R1_022.ab1   322 
  466    MoSU005F_C04_BE591127Ld07P015H01H071F1_022.ab1   348 
  482  C MoSU005R_C04_BE591127Ld07P015H01H071R1_022.ab1   298 
  598    MoSU005F_C04_BE591127Ld07P015H01H071F1_022.ab1   480 
  606  C MoSU005R_C04_BE591127Ld07P015H01H071R1_022.ab1   174 
  622    MoSU005F_C04_BE591127Ld07P015H01H071F1_022.ab1   504 
  630  C MoSU005R_C04_BE591127Ld07P015H01H071R1_022.ab1   150 
  646    MoSU005F_C04_BE591127Ld07P015H01H071F1_022.ab1   528 
  654  C MoSU005R_C04_BE591127Ld07P015H01H071R1_022.ab1   126 
  730    MoSU005F_C04_BE591127Ld07P015H01H071F1_022.ab1   612 
  742  C MoSU005R_C04_BE591127Ld07P015H01H071R1_022.ab1    38 
  754    MoSU005F_C04_BE591127Ld07P015H01H071F1_022.ab1   636 
Contig length: old 909, new 910

Contig length: old 910, new 910
New start: 0