No. words: 1535; after pruning: 1509


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.9 (1,1:624)  620  0.00 0.00 0.00  MoSU005F_E04_BE591127Ld09P015H01H071F1_023.ab1        1   625 (130)  C MoSU005R_E04_BE591127Ld09P015H01H071R1_023.ab1   (155)   625     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  312 nodes

 158 str. conn. components

Path
    1  C MoSU005R_E04_BE591127Ld09P015H01H071R1_023.ab1   780 
  163    MoSU005F_E04_BE591127Ld09P015H01H071F1_023.ab1     8 
  179  C MoSU005R_E04_BE591127Ld09P015H01H071R1_023.ab1   602 
  183    MoSU005F_E04_BE591127Ld09P015H01H071F1_023.ab1    28 
  187  C MoSU005R_E04_BE591127Ld09P015H01H071R1_023.ab1   594 
  195    MoSU005F_E04_BE591127Ld09P015H01H071F1_023.ab1    40 
  203  C MoSU005R_E04_BE591127Ld09P015H01H071R1_023.ab1   578 
  211    MoSU005F_E04_BE591127Ld09P015H01H071F1_023.ab1    56 
  279  C MoSU005R_E04_BE591127Ld09P015H01H071R1_023.ab1   502 
  283    MoSU005F_E04_BE591127Ld09P015H01H071F1_023.ab1   128 
  303  C MoSU005R_E04_BE591127Ld09P015H01H071R1_023.ab1   478 
  307    MoSU005F_E04_BE591127Ld09P015H01H071F1_023.ab1   152 
  311  C MoSU005R_E04_BE591127Ld09P015H01H071R1_023.ab1   470 
  315    MoSU005F_E04_BE591127Ld09P015H01H071F1_023.ab1   160 
  319  C MoSU005R_E04_BE591127Ld09P015H01H071R1_023.ab1   462 
  327    MoSU005F_E04_BE591127Ld09P015H01H071F1_023.ab1   172 
  339  C MoSU005R_E04_BE591127Ld09P015H01H071R1_023.ab1   442 
  343    MoSU005F_E04_BE591127Ld09P015H01H071F1_023.ab1   188 
  347  C MoSU005R_E04_BE591127Ld09P015H01H071R1_023.ab1   434 
  351    MoSU005F_E04_BE591127Ld09P015H01H071F1_023.ab1   196 
  363  C MoSU005R_E04_BE591127Ld09P015H01H071R1_023.ab1   418 
  371    MoSU005F_E04_BE591127Ld09P015H01H071F1_023.ab1   216 
  379  C MoSU005R_E04_BE591127Ld09P015H01H071R1_023.ab1   402 
  423    MoSU005F_E04_BE591127Ld09P015H01H071F1_023.ab1   268 
  451  C MoSU005R_E04_BE591127Ld09P015H01H071R1_023.ab1   330 
  507    MoSU005F_E04_BE591127Ld09P015H01H071F1_023.ab1   352 
  511  C MoSU005R_E04_BE591127Ld09P015H01H071R1_023.ab1   270 
  523    MoSU005F_E04_BE591127Ld09P015H01H071F1_023.ab1   368 
  539  C MoSU005R_E04_BE591127Ld09P015H01H071R1_023.ab1   242 
  591    MoSU005F_E04_BE591127Ld09P015H01H071F1_023.ab1   436 
  607  C MoSU005R_E04_BE591127Ld09P015H01H071R1_023.ab1   174 
  627    MoSU005F_E04_BE591127Ld09P015H01H071F1_023.ab1   472 
  635  C MoSU005R_E04_BE591127Ld09P015H01H071R1_023.ab1   146 
  643    MoSU005F_E04_BE591127Ld09P015H01H071F1_023.ab1   488 
  655  C MoSU005R_E04_BE591127Ld09P015H01H071R1_023.ab1   126 
  671    MoSU005F_E04_BE591127Ld09P015H01H071F1_023.ab1   516 
  675  C MoSU005R_E04_BE591127Ld09P015H01H071R1_023.ab1   106 
  699    MoSU005F_E04_BE591127Ld09P015H01H071F1_023.ab1   544 
  703  C MoSU005R_E04_BE591127Ld09P015H01H071R1_023.ab1    78 
  731    MoSU005F_E04_BE591127Ld09P015H01H071F1_023.ab1   576 
  743  C MoSU005R_E04_BE591127Ld09P015H01H071R1_023.ab1    38 
  755    MoSU005F_E04_BE591127Ld09P015H01H071F1_023.ab1   600 
Contig length: old 910, new 910

Contig length: old 910, new 910
New start: 0