No. words: 1175; after pruning: 1149


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.0 (1,1:611)  551  0.53 0.00 0.00  MoSU013F_G08_BE591127Ld09P018A02P018A081F1_052.ab1       16   578 (0)  C MoSU013R_G08_BE591127Ld09P018A02P018A081R1_052.ab1   (0)   597    35 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  274 nodes

 139 str. conn. components

Path
    1    MoSU013F_G08_BE591127Ld09P018A02P018A081F1_052.ab1     1 
   91  C MoSU013R_G08_BE591127Ld09P018A02P018A081R1_052.ab1   522 
   95    MoSU013F_G08_BE591127Ld09P018A02P018A081F1_052.ab1    95 
  411  C MoSU013R_G08_BE591127Ld09P018A02P018A081R1_052.ab1   202 
  519    MoSU013F_G08_BE591127Ld09P018A02P018A081F1_052.ab1   519 
  527  C MoSU013R_G08_BE591127Ld09P018A02P018A081R1_052.ab1    86 
Contig length: old 612, new 612

Contig length: old 612, new 612
New start: 0 
S Change at: 567; seg lengths: entry 1, contig 1