No. words: 1567; after pruning: 1541


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.2 (1,1:646)  640  0.15 0.00 0.00  MoSU005F_F04_BE591127Ld10P015H01H071F1_031.ab1        1   647 (134)  C MoSU005R_F04_BE591127Ld10P015H01H071R1_031.ab1   (139)   647     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  320 nodes

 162 str. conn. components

Path
    1  C MoSU005R_F04_BE591127Ld10P015H01H071R1_031.ab1   786 
  143    MoSU005F_F04_BE591127Ld10P015H01H071F1_031.ab1     4 
  147  C MoSU005R_F04_BE591127Ld10P015H01H071R1_031.ab1   640 
  167    MoSU005F_F04_BE591127Ld10P015H01H071F1_031.ab1    28 
  187  C MoSU005R_F04_BE591127Ld10P015H01H071R1_031.ab1   600 
  191    MoSU005F_F04_BE591127Ld10P015H01H071F1_031.ab1    52 
  195  C MoSU005R_F04_BE591127Ld10P015H01H071R1_031.ab1   592 
  203    MoSU005F_F04_BE591127Ld10P015H01H071F1_031.ab1    64 
  383  C MoSU005R_F04_BE591127Ld10P015H01H071R1_031.ab1   404 
  399    MoSU005F_F04_BE591127Ld10P015H01H071F1_031.ab1   260 
  407  C MoSU005R_F04_BE591127Ld10P015H01H071R1_031.ab1   380 
  415    MoSU005F_F04_BE591127Ld10P015H01H071F1_031.ab1   276 
  423  C MoSU005R_F04_BE591127Ld10P015H01H071R1_031.ab1   364 
  435    MoSU005F_F04_BE591127Ld10P015H01H071F1_031.ab1   296 
  459  C MoSU005R_F04_BE591127Ld10P015H01H071R1_031.ab1   328 
  463    MoSU005F_F04_BE591127Ld10P015H01H071F1_031.ab1   324 
  487  C MoSU005R_F04_BE591127Ld10P015H01H071R1_031.ab1   300 
  503    MoSU005F_F04_BE591127Ld10P015H01H071F1_031.ab1   364 
  523  C MoSU005R_F04_BE591127Ld10P015H01H071R1_031.ab1   264 
  527    MoSU005F_F04_BE591127Ld10P015H01H071F1_031.ab1   388 
  543  C MoSU005R_F04_BE591127Ld10P015H01H071R1_031.ab1   244 
  599    MoSU005F_F04_BE591127Ld10P015H01H071F1_031.ab1   460 
  615  C MoSU005R_F04_BE591127Ld10P015H01H071R1_031.ab1   172 
  619    MoSU005F_F04_BE591127Ld10P015H01H071F1_031.ab1   480 
  627  C MoSU005R_F04_BE591127Ld10P015H01H071R1_031.ab1   160 
  639    MoSU005F_F04_BE591127Ld10P015H01H071F1_031.ab1   500 
  643  C MoSU005R_F04_BE591127Ld10P015H01H071R1_031.ab1   144 
  655    MoSU005F_F04_BE591127Ld10P015H01H071F1_031.ab1   516 
  659  C MoSU005R_F04_BE591127Ld10P015H01H071R1_031.ab1   128 
  675    MoSU005F_F04_BE591127Ld10P015H01H071F1_031.ab1   536 
  687  C MoSU005R_F04_BE591127Ld10P015H01H071R1_031.ab1   100 
  739    MoSU005F_F04_BE591127Ld10P015H01H071F1_031.ab1   600 
  751  C MoSU005R_F04_BE591127Ld10P015H01H071R1_031.ab1    36 
  763    MoSU005F_F04_BE591127Ld10P015H01H071F1_031.ab1   624 
Contig length: old 920, new 920

Contig length: old 920, new 920
New start: 0