No. words: 1551; after pruning: 1511


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.4 (1,1:647)  643  0.15 0.00 0.00  MoSU005F_H04_BE591127Ld12P015H01H071F1_032.ab1        1   648 (127)  C MoSU005R_H04_BE591127Ld12P015H01H071R1_032.ab1   (128)   648     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  320 nodes

 162 str. conn. components

Path
    1  C MoSU005R_H04_BE591127Ld12P015H01H071R1_032.ab1   776 
  132    MoSU005F_H04_BE591127Ld12P015H01H071F1_032.ab1     4 
  145  C MoSU005R_H04_BE591127Ld12P015H01H071R1_032.ab1   632 
  153    MoSU005F_H04_BE591127Ld12P015H01H071F1_032.ab1    25 
  265  C MoSU005R_H04_BE591127Ld12P015H01H071R1_032.ab1   512 
  269    MoSU005F_H04_BE591127Ld12P015H01H071F1_032.ab1   141 
  281  C MoSU005R_H04_BE591127Ld12P015H01H071R1_032.ab1   496 
  285    MoSU005F_H04_BE591127Ld12P015H01H071F1_032.ab1   157 
  297  C MoSU005R_H04_BE591127Ld12P015H01H071R1_032.ab1   480 
  301    MoSU005F_H04_BE591127Ld12P015H01H071F1_032.ab1   173 
  369  C MoSU005R_H04_BE591127Ld12P015H01H071R1_032.ab1   408 
  401    MoSU005F_H04_BE591127Ld12P015H01H071F1_032.ab1   273 
  421  C MoSU005R_H04_BE591127Ld12P015H01H071R1_032.ab1   356 
  425    MoSU005F_H04_BE591127Ld12P015H01H071F1_032.ab1   297 
  449  C MoSU005R_H04_BE591127Ld12P015H01H071R1_032.ab1   328 
  453    MoSU005F_H04_BE591127Ld12P015H01H071F1_032.ab1   325 
  457  C MoSU005R_H04_BE591127Ld12P015H01H071R1_032.ab1   320 
  461    MoSU005F_H04_BE591127Ld12P015H01H071F1_032.ab1   333 
  465  C MoSU005R_H04_BE591127Ld12P015H01H071R1_032.ab1   312 
  469    MoSU005F_H04_BE591127Ld12P015H01H071F1_032.ab1   341 
  473  C MoSU005R_H04_BE591127Ld12P015H01H071R1_032.ab1   304 
  497    MoSU005F_H04_BE591127Ld12P015H01H071F1_032.ab1   369 
  509  C MoSU005R_H04_BE591127Ld12P015H01H071R1_032.ab1   268 
  541    MoSU005F_H04_BE591127Ld12P015H01H071F1_032.ab1   413 
  549  C MoSU005R_H04_BE591127Ld12P015H01H071R1_032.ab1   228 
  585    MoSU005F_H04_BE591127Ld12P015H01H071F1_032.ab1   457 
  593  C MoSU005R_H04_BE591127Ld12P015H01H071R1_032.ab1   184 
  609    MoSU005F_H04_BE591127Ld12P015H01H071F1_032.ab1   481 
  629  C MoSU005R_H04_BE591127Ld12P015H01H071R1_032.ab1   148 
  645    MoSU005F_H04_BE591127Ld12P015H01H071F1_032.ab1   517 
  649  C MoSU005R_H04_BE591127Ld12P015H01H071R1_032.ab1   128 
  665    MoSU005F_H04_BE591127Ld12P015H01H071F1_032.ab1   537 
  673  C MoSU005R_H04_BE591127Ld12P015H01H071R1_032.ab1   104 
  693    MoSU005F_H04_BE591127Ld12P015H01H071F1_032.ab1   565 
  697  C MoSU005R_H04_BE591127Ld12P015H01H071R1_032.ab1    80 
  725    MoSU005F_H04_BE591127Ld12P015H01H071F1_032.ab1   597 
  737  C MoSU005R_H04_BE591127Ld12P015H01H071R1_032.ab1    40 
  753    MoSU005F_H04_BE591127Ld12P015H01H071F1_032.ab1   625 
Contig length: old 903, new 903

Contig length: old 903, new 903
New start: 0